29 c1rr2A_ Probab=97.84   E-value=0.003  Score=40.92  Aligned_columns=214  Identities=14%

Q ss_pred             CEEECCCCEEEEEEECCC-CCC-CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             674279986999985675-314-788656898999999999998799799987833789876689689999999999999
Q batch____         8 TSLDLSHPHVMGILNVTP-DSF-SDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAI   85 (282)
Q Consensus         8 ~~~~~~~~~imgilN~tp-dSF-sdgg~~~~~~~a~~~a~~~~~~GAdiIDIG~eSTrPga~~v~~~eE~~rl~p~i~~i   85 (282)
                      |.+.+..|+=.-|+.+|+ |-+ |-.+..++.++-++-+..+.+.|-+.|++|+-.|..-...--.+.+|+|+..+.+.+
T Consensus         2 ~~~~~~~pk~V~I~DtTLRDG~Qsl~~~~~~t~dki~Ia~~L~~aGv~~IEvg~~a~~~~~~~~~~ed~~e~lr~~~~~~   81 (472)
T c1rr2A_           2 REIEVSEPREVGITELVLRDAHQSLMATRMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLM   81 (472)
T ss_dssp             CCCCCCCSEECEEEECTTTHHHHHHHTTCCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHC
T ss_pred             CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHC
T ss_conf             87887899428999658985652777853788999999999997699899961886815657660889899999999737


Q ss_pred             HHHCCCEEEEECCCH--------------HHHHHHHHCCCCEEECCCCCCC----HHHHHHHHHCCCCEE--EECCCCCC
Q ss_conf             974498499977998--------------9999999709946870766888----879999997299499--98789899
Q batch____        86 AQRFEVWISVDTSKP--------------EVIRESAKVGAHIINDIRSLSE----PGALEAAAETGLPVC--LMHMQGNP  145 (282)
Q Consensus        86 ~~~~~vpISIDT~~~--------------~v~~aal~~G~~iINdvsg~~d----~~~~~~~a~~~~~vV--lmh~~g~p  145 (282)
                         .+.+++.=+...              ..++.+.+.|.++++-....++    ....+.+++.|..+.  ++..-+.+
T Consensus        82 ---p~~~l~~l~Rg~n~vg~~~~~~~~v~~~i~~a~~~gi~~~ri~~~l~~i~~~~~~v~~ak~~G~~v~~~i~~~~~~~  158 (472)
T c1rr2A_          82 ---PNSRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPV  158 (472)
T ss_dssp             ---TTSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTT
T ss_pred             ---CCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC
T ss_conf             ---99889996034300133205401369999988746998798536465999999999999986985999999603889


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCE-EEEECCHHHH
Q ss_conf             871107750017999999999999999976998767888078876479789999999899999669988-9963544687
Q batch____       146 KTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPL-LVGMSRKSMI  224 (282)
Q Consensus       146 ~~~~~~~~~~~~~~e~~~~l~~~i~~a~~~GI~~~~IilDPGiGf~k~~~~~~~ll~~i~~~~~lg~Pi-l~G~SrKsfi  224 (282)
                      .+.              .++.+.++.+.++|+.  .|.|==-.|.. ++.+-.++++.+++--.-+.|+ +-+|      
T Consensus       159 ~~~--------------e~~~~~~~~l~e~Gad--~I~l~DT~G~~-~P~~v~~lv~~lr~~~~~di~i~~H~H------  215 (472)
T c1rr2A_         159 HTV--------------EGYVKLAGQLLDMGAD--SIALKDMAALL-KPQPAYDIIKAIKDTYGQKTQINLHCH------  215 (472)
T ss_dssp             CCH--------------HHHHHHHHHHHHTTCS--EEEEEETTCCC-CHHHHHHHHHHHHHHHCTTCCEEEEEB------
T ss_pred             CCH--------------HHHHHHHHHHHHCCCC--EEEECCCCCCC-CHHHHHHHHHHHHHHCCCCCEEEEECC------
T ss_conf             998--------------9999999999975998--89972853568-989999999999985287888999811------


Q ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             76738998883557999999999759989991
Q batch____       225 GQLLNVGPSERLSGSLACAVIAAMQGAHIIRV  256 (282)
Q Consensus       225 g~~~~~~~~~r~~~t~~~~~~a~~~Ga~iiRv  256 (282)
                               +-.+...+.+..|+..|++++-+
T Consensus       216 ---------nd~GlAvAN~LaAi~aGad~vD~  238 (472)
T c1rr2A_         216 ---------STTGVTEVSLMKAIEAGVDVVDT  238 (472)
T ss_dssp             ---------CTTSCHHHHHHHHHHTTCSEEEE
T ss_pred             ---------CCCCHHHHHHHHHHHCCCCEEEE
T ss_conf             ---------88555999999999705868762