Job Description P37676 Confidence 95.16% Date Thu Jan 5 11:56:50 GMT 2012 Rank 53 Aligned Residues 240 % Identity 16% Template d1sw5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.80

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	L	R	F	G	Y	E	T	S	Q	T	D	S	Q	H	I	A	A	K	K	F	N	D	L	L	Q	E	R	T	K	G	E	L	K	L	K	L	F	P	D	S	T	L	G	N	A	Q	A	M	I	S	G	V	R	G	G	T	I	D	M	E	M	S	G	S	N	N	F	A	G	L	S	P	V	M	N	L	L	D
Query Conservation
Alig confidence										.	.	.																													.	.	.	.																			.	.	.
Template Conservation										.	.	.																													.	.	.	.																			.	.	.
Template Sequence		E	R	V	V	I	G	S	K	.	.	.	P	F	N	E	Q	Y	I	L	A	N	M	I	A	I	L	L	E	E	N	G	Y	K	A	E	V	K	E	G	.	.	.	.	L	G	G	T	L	V	N	Y	E	A	L	K	R	N	D	I	Q	L	.	.	.	Y	V	E	Y	T	G	T	A	Y	N	V	I	L	R	K	Q
Template Known Secondary structure										.	.	.	S	S																	T	T							T	T	.	.	.	.			S											T	S	S	S		.	.	.											T	T	S
Template Predicted Secondary structure										.	.	.																													.	.	.	.																			.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.											.	.	.	.							.	.	.
Query SS confidence																																																					.	.	.	.	.	.											.	.	.	.							.	.	.
Query Sequence		V	P	F	L	F	R	D	T	A	H	A	H	K	T	L	D	G	K	V	G	D	D	L	K	A	S	L	E	G	K	G	L	K	V	L	A	Y	W	E	N	G	W	R	D	V	T	N	S	R	A	P	.	.	.	.	.	.	V	K	T	P	A	D	L	K	G	L	.	.	.	.	K	I	R	T	N	N	.	.	.
Query Conservation																																																					.	.	.	.	.	.											.	.	.	.							.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																											.	.	.	.	.	.											.	.	.	.							.	.	.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		P	P	E	L	W	D	Q	Q	Y	I	F	D	E	V	K	K	G	.	.	.	.	.	.	.	.	L	L	E	A	D	G	V	V	V	A	A	K	L	G	F	R	D	D	Y	A	L	A	V	R	A	D	W	A	E	E	N	G	V	E	K	I	S	D	L	A	E	F	A	D	Q	L	V	F	G	S	D	P	E	F	A
Template Known Secondary structure				S	S														.	.	.	.	.	.	.	.																																T			B	G	G	G	G	T	T	T	G	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
				173	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.
Predicted Secondary structure		.	.													.	.	.																																																						.	.
Query SS confidence		.	.													.	.	.																																																						.	.
Query Sequence		.	.	S	P	M	N	I	A	A	F	K	V	F	G	.	.	.	A	N	P	I	P	M	P	F	A	E	V	Y	T	G	L	E	T	R	T	I	D	A	Q	E	H	P	I	N	V	V	W	S	A	K	F	F	E	V	Q	K	F	L	S	L	T	H	H	A	Y	S	P	L	L	.	.	V	V	I	N	K	A	K	F
Query Conservation		.	.													.	.	.																																																						.	.
Alig confidence		.	.													.	.	.																																					.	.																.	.
Template Conservation																																																							.	.
Template Sequence		S	R	P	D	G	L	P	Q	I	K	K	V	Y	G	F	E	F	K	E	V	K	Q	M	E	P	T	L	M	Y	E	A	I	K	N	K	Q	V	D	V	I	P	A	Y	T	T	D	S	R	V	D	L	F	N	.	.	L	K	I	L	E	D	D	K	G	A	L	P	P	Y	D	A	I	I	I	V	N	G	N	T	A
Template Known Secondary structure			S	T	T	S									T				S							G	G	G							T	T	S		S						T	T							T	T	.	.					B		T	T			S											T	T	G	G
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.														.	.	.
Query SS confidence																.	.	.	.	.														.	.	.
Query Sequence		D	G	L	S	P	E	F	Q	Q	A	L	V	S	S	.	.	.	.	.	A	Q	E	A	G	N	Y	Q	R	K	L	V	A	.	.	.	E	D	Q	Q	K	I	I	D	G	M	K	E	A	G	V
Query Conservation																.	.	.	.	.														.	.	.
Alig confidence			.	.												.	.	.	.	.														.	.	.
Template Conservation			.	.
Template Sequence		K	.	.	D	E	K	L	I	S	V	L	K	L	L	E	D	R	I	D	T	D	T	M	R	A	L	N	Y	Q	Y	D	V	E	K	K	D	A	R	E	I	A	M	S	F	L	K	E	Q	G	L
Template Known Secondary structure		G	.	.										T	T	T	T																T	S																T	S
Template Predicted Secondary structure			.	.
Template SS confidence
		226			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions