53 d1sw5a_ Probab=95.16   E-value=0.23  Score=27.48  Aligned_columns=240  Identities=16%

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHC
Q ss_conf             56888841689886889999999999973399089999417764898999999976994089851510200116567612
Q batch____        26 QSLRFGYETSQTDSQHIAAKKFNDLLQERTKGELKLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLD  105 (328)
Q Consensus        26 ~~lr~~~~~~~~~~~~~~~~~fa~~v~e~T~G~i~i~~~~~g~lg~~~~~~~~v~~G~id~~~~~~~~~~~~~p~~~~~~  105 (328)
                      .+++|++.   +....+.+.+....+=|..|-.++++..    +++...++.++.+|.+|+   .+.|.......+.--.
T Consensus         1 ~~i~ig~~---~w~~~~v~a~i~~~~Le~~Gy~v~~~~~----~~~~~~~~~aL~~GdiDv---~~e~tg~~w~~~~~~~   70 (270)
T d1sw5a_           1 ERVVIGSK---PFNEQYILANMIAILLEENGYKAEVKEG----LGGTLVNYEALKRNDIQL---YVEYTGTAYNVILRKQ   70 (270)
T ss_dssp             CCEEECCC---SSHHHHHHHHHHHHHHHHTTCCEEECTT----CCSHHHHHHHHHHTSSSE---EEEEHHHHHHTTSCCC
T ss_pred             CEEEEECC---CCHHHHHHHHHHHHHHHHCCCCEEEEEC----CCCHHHHHHHHHCCCCEE---EEECCCHHHHHCCCCC
T ss_conf             94999514---8607899999999999976981489851----673389999987398308---9601002333105554


Q ss_pred             CCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCC------CCCHHHHCCC----EEEEEC---
Q ss_conf             878798989999997027889999999857958999830567012533576------8984683897----899729---
Q batch____       106 VPFLFRDTAHAHKTLDGKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAP------VKTPADLKGL----KIRTNN---  172 (328)
Q Consensus       106 lP~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~~~~g~~~~~~~~~p------i~s~~DlkG~----kiR~~~---  172 (328)
                      .+-..+..+....+...        ..++.|+.++........+.+.-.+.      |+|++||+..    ++...+   
T Consensus        71 ~~~~~~~~~~~~~~~~~--------~~~~~gl~~~~~~~~~~~~~~~v~~~~a~~~~l~si~DL~~~~~~~~~g~~~~~~  142 (270)
T d1sw5a_          71 PPELWDQQYIFDEVKKG--------LLEADGVVVAAKLGFRDDYALAVRADWAEENGVEKISDLAEFADQLVFGSDPEFA  142 (270)
T ss_dssp             CCSSCCHHHHHHHHHHH--------HHHHHCCEEEEEEEEECCEEEEEEHHHHHHHTCCBGGGGTTTGGGCEEEECHHHH
T ss_pred             CCCCCCHHHHHHHHHHH--------CCCCCCEEEECCCCCCCCCEEEECHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             42235878899999740--------1111685860543455542034064550505833388734310012136775667


Q ss_pred             --CHHHHHHHHHHC---CEEEECCHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCEECCCCCHHEEE--EEEEHHHH
Q ss_conf             --889999999709---91787078898879853844358428678652775132561755685412012--26747673
Q batch____       173 --SPMNIAAFKVFG---ANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFFEVQKFLSLTHHAYSPLL--VVINKAKF  245 (328)
Q Consensus       173 --s~~~~~~~~~~G---a~pv~~~~~ev~~AL~~G~vDg~~~~~~~~~~~~~~ev~~y~~~~~~~~~~~~--~~in~~~~  245 (328)
                        ......+.+..|   .....+..+.+++|+++|..+....+.+.....++.  .+++-++.+.+....  .++|+++.
T Consensus       143 ~~~~g~~~~~~~ygl~~~~~~~~~~a~~~~A~~~~~~~v~~~w~P~~~~~~~d--l~~LeDp~~~~~~~~~~~~v~~~~~  220 (270)
T d1sw5a_         143 SRPDGLPQIKKVYGFEFKEVKQMEPTLMYEAIKNKQVDVIPAYTTDSRVDLFN--LKILEDDKGALPPYDAIIIVNGNTA  220 (270)
T ss_dssp             HSTTSHHHHHHHHTCCCSEEEECCGGGHHHHHHTTSCSEEEEETTCHHHHHTT--EEECBCTTCCSCCCEEEEEECTTGG
T ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCC--EEEEECCCCCCCCCHHHHHHCHHHH
T ss_conf             52458999999818984223247989999998629948999524786633177--4896268652674112331043354


Q ss_pred             HCCCHHHHHHHHHH-----HHHHHHHHHHHHH---HHHHHHHHHHHHCCC
Q ss_conf             01898999999999-----9999999999999---999999999997898
Q batch____       246 DGLSPEFQQALVSS-----AQEAGNYQRKLVA---EDQQKIIDGMKEAGV  287 (328)
Q Consensus       246 ~~L~~e~q~~l~~a-----~~~~~~~~~~~~~---~~~~~~~~~~~~~Gv  287 (328)
                      +  .|+..++|...     .....+.......   +-++.+.+++.++|.
T Consensus       221 ~--~P~~~~~l~~~~~~l~~~~l~~l~~~v~~~~~~~~~vA~~wl~~n~l  268 (270)
T d1sw5a_         221 K--DEKLISVLKLLEDRIDTDTMRALNYQYDVEKKDAREIAMSFLKEQGL  268 (270)
T ss_dssp             G--CHHHHHHHHTTTTCCCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHTS
T ss_pred             H--CHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf             0--96899999986104999999999999860699989999999996899