Email l.a.kelley@imperial.ac.uk Description P0A817 Date Thu Jan 5 11:06:38 GMT 2012 Unique Job ID 880a708c72f867e0

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1rg9D_ 100.0 100 PDB header:transferase Chain: D: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: s-adenosylmethionine synthetase complexed with sam and ppnp 2 c2obvA_ 100.0 57 PDB header:transferase Chain: A: PDB Molecule:s-adenosylmethionine synthetase isoform type-1; PDBTitle: crystal structure of the human s-adenosylmethionine synthetase 1 in2 complex with the product 3 c3so4C_ 100.0 52 PDB header:transferase Chain: C: PDB Molecule:methionine-adenosyltransferase; PDBTitle: methionine-adenosyltransferase from entamoeba histolytica 4 c3imlB_ 100.0 72 PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from burkholderia2 pseudomallei 5 c3rv2B_ 100.0 62 PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from2 mycobacterium marinum 6 d1mxaa3 100.0 100 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 7 d2p02a3 100.0 62 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 8 d1qm4a3 100.0 64 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 9 d1mxaa2 100.0 100 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 10 d2p02a2 100.0 48 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 11 d1qm4a2 100.0 49 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 12 d2p02a1 100.0 61 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 13 d1mxaa1 100.0 100 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 14 d1qm4a1 100.0 62 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 15 c3k8zD_ 82.9 13 PDB header:oxidoreductase Chain: D: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of gudb1 a decryptified secondary glutamate2 dehydrogenase from b. subtilis 16 d2dt5a1 82.1 28 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Transcriptional repressor Rex, N-terminal domain 17 c2bmaA_ 56.4 19 PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase (nadp+); PDBTitle: the crystal structure of plasmodium falciparum glutamate2 dehydrogenase, a putative target for novel antimalarial3 drugs 18 d1w9ha1 54.5 23 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:PIWI domain 19 c3lvtA_ 51.4 22 PDB header:hydrolase Chain: A: PDB Molecule:glycosyl hydrolase, family 38; PDBTitle: the crystal structure of a protein in the glycosyl hydrolase2 family 38 from enterococcus faecalis to 2.55a 20 c2inrA_ 48.9 20 PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase 4 subunit a; PDBTitle: crystal structure of a 59 kda fragment of topoisomerase iv subunit a2 (grla) from staphylococcus aureus 21 c2w42A_ not modelled 40.4 24 PDB header:protein/dna complex Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: the structure of a piwi protein from archaeoglobus fulgidus2 complexed with a 16nt dna duplex. 22 d1u04a2 not modelled 39.0 31 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:PIWI domain 23 d1euza2 not modelled 36.1 18 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 24 c3ketA_ not modelled 34.9 17 PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator 25 d1kjna_ not modelled 34.4 29 Fold:Hypothetical protein MTH777 (MT0777) Superfamily:Hypothetical protein MTH777 (MT0777) Family:Hypothetical protein MTH777 (MT0777) 26 c3aoeC_ not modelled 31.1 20 PDB header:oxidoreductase Chain: C: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of hetero-hexameric glutamate dehydrogenase from2 thermus thermophilus (leu bound form) 27 d2fiqa1 not modelled 28.4 19 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:GatZ-like 28 c2dt5A_ not modelled 27.9 28 PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 29 d1to0a_ not modelled 24.0 60 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like 30 d2fm8a1 not modelled 23.6 22 Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Type III secretory system chaperone 31 c2vofA_ not modelled 22.7 8 PDB header:apoptosis Chain: A: PDB Molecule:bcl-2-related protein a1; PDBTitle: structure of mouse a1 bound to the puma bh3-domain 32 d1vh0a_ not modelled 22.7 75 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like 33 c1hrdA_ not modelled 22.2 19 PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: glutamate dehydrogenase 34 d1ns5a_ not modelled 22.0 50 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like 35 d1o6da_ not modelled 21.3 63 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like 36 d1b26a2 not modelled 20.9 23 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 37 c2z51A_ not modelled 20.1 20 PDB header:metal transport Chain: A: PDB Molecule:nifu-like protein 2, chloroplast; PDBTitle: crystal structure of arabidopsis cnfu involved in iron-2 sulfur cluster biosynthesis 38 d1vkha_ not modelled 19.8 19 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Putative serine hydrolase Ydr428c 39 d1azpa_ not modelled 17.4 40 Fold:SH3-like barrel Superfamily:Chromo domain-like Family:"Histone-like" proteins from archaea 40 c1u04A_ not modelled 17.3 46 PDB header:hydrolase/gene regulation Chain: A: PDB Molecule:hypothetical protein pf0537; PDBTitle: crystal structure of full length argonaute from pyrococcus furiosus 41 c1v57A_ not modelled 16.5 26 PDB header:isomerase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbg; PDBTitle: crystal structure of the disulfide bond isomerase dsbg 42 c2jvfA_ not modelled 15.4 9 PDB header:de novo protein Chain: A: PDB Molecule:de novo protein m7; PDBTitle: solution structure of m7, a computationally-designed2 artificial protein 43 d1q33a_ not modelled 15.3 60 Fold:Nudix Superfamily:Nudix Family:MutT-like 44 c2bh7A_ not modelled 14.4 26 PDB header:hydrolase Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase; PDBTitle: crystal structure of a semet derivative of amid at 2.22 angstroms 45 d1gtma2 not modelled 14.1 13 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 46 c3lwaA_ not modelled 13.9 21 PDB header:isomerase Chain: A: PDB Molecule:secreted thiol-disulfide isomerase; PDBTitle: the crystal structure of a secreted thiol-disulfide2 isomerase from corynebacterium glutamicum to 1.75a 47 c3h6nA_ not modelled 13.7 14 PDB header:signaling protein Chain: A: PDB Molecule:plexin-d1; PDBTitle: crystal structure of the ubiquitin-like domain of plexin d1 48 d2f9wa2 not modelled 13.5 50 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:CoaX-like 49 c2gjhA_ not modelled 13.1 18 PDB header:de novo protein Chain: A: PDB Molecule:designed protein; PDBTitle: nmr structure of cfr (c-terminal fragment of2 computationally designed novel-topology protein top7) 50 c2fmmE_ not modelled 13.0 21 PDB header:transcription Chain: E: PDB Molecule:protein emsy; PDBTitle: crystal structure of emsy-hp1 complex 51 d1lfda_ not modelled 12.9 17 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 52 d2fmme1 not modelled 12.9 21 Fold:ENT-like Superfamily:ENT-like Family:Emsy N terminal (ENT) domain-like 53 d1vhfa_ not modelled 12.8 11 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 54 d1t0ga_ not modelled 12.7 39 Fold:Cytochrome b5-like heme/steroid binding domain Superfamily:Cytochrome b5-like heme/steroid binding domain Family:Steroid-binding domain 55 c1wnkA_ not modelled 12.4 50 PDB header:transcription Chain: A: PDB Molecule:fibroin-modulator-binding-protein-1; PDBTitle: nmr structure of fmbp-1 tandem repeat 3 in 30%(v/v) tfe2 solution 56 d1uz3a1 not modelled 12.3 21 Fold:ENT-like Superfamily:ENT-like Family:Emsy N terminal (ENT) domain-like 57 d1knga_ not modelled 12.2 8 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 58 d1ztpa1 not modelled 12.0 16 Fold:eIF4e-like Superfamily:eIF4e-like Family:BLES03-like 59 c2jkzB_ not modelled 12.0 44 PDB header:transferase Chain: B: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase; PDBTitle: saccharomyces cerevisiae hypoxanthine-guanine2 phosphoribosyltransferase in complex with gmp (guanosine 5'3 -monophosphate) (orthorhombic crystal form) 60 d1p1la_ not modelled 11.5 32 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 61 d1yvua2 not modelled 11.5 18 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:PIWI domain 62 c2tmgD_ not modelled 11.4 18 PDB header:oxidoreductase Chain: D: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: thermotoga maritima glutamate dehydrogenase mutant s128r,2 t158e, n117r, s160e 63 d2bu3a1 not modelled 11.2 26 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Phytochelatin synthase 64 c2zfhA_ not modelled 11.1 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cuta; PDBTitle: crystal structure of putative cuta1 from homo sapiens at 2.05a2 resolution 65 c3kh0A_ not modelled 11.1 19 PDB header:signaling protein Chain: A: PDB Molecule:ral guanine nucleotide dissociation stimulator; PDBTitle: crystal structure of the ras-association (ra) domain of2 ralgds 66 c2zomC_ not modelled 11.0 26 PDB header:unknown function Chain: C: PDB Molecule:protein cuta, chloroplast, putative, expressed; PDBTitle: crystal structure of cuta1 from oryza sativa 67 d1ah4a_ not modelled 11.0 12 Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP) 68 c1qysA_ not modelled 10.6 25 PDB header:de novo protein Chain: A: PDB Molecule:top7; PDBTitle: crystal structure of top7: a computationally designed2 protein with a novel fold 69 c2wl2B_ not modelled 10.6 18 PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit a; PDBTitle: crystal structure of n-terminal domain of gyra with the2 antibiotic simocyclinone d8 70 d2bgxa2 not modelled 10.5 26 Fold:N-acetylmuramoyl-L-alanine amidase-like Superfamily:N-acetylmuramoyl-L-alanine amidase-like Family:N-acetylmuramoyl-L-alanine amidase-like 71 d1naqa_ not modelled 10.1 26 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 72 d1bf4a_ not modelled 10.0 48 Fold:SH3-like barrel Superfamily:Chromo domain-like Family:"Histone-like" proteins from archaea 73 d1rlfa_ not modelled 9.5 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 74 d1nzaa_ not modelled 9.4 42 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 75 c2btwA_ not modelled 9.2 26 PDB header:transferase Chain: A: PDB Molecule:alr0975 protein; PDBTitle: crystal structure of alr0975 76 c3ag7A_ not modelled 9.0 35 PDB header:plant protein Chain: A: PDB Molecule:putative uncharacterized protein f9e10.5; PDBTitle: an auxilin-like j-domain containing protein, jac1 j-domain 77 d2rgfa_ not modelled 9.0 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 78 c2nuhA_ not modelled 8.9 21 PDB header:unknown function Chain: A: PDB Molecule:periplasmic divalent cation tolerance protein; PDBTitle: crystal structure of cuta from the phytopathgen bacterium xylella2 fastidiosa 79 c3gdeA_ not modelled 8.9 18 PDB header:ligase Chain: A: PDB Molecule:dna ligase; PDBTitle: the closed conformation of atp-dependent dna ligase from2 archaeoglobus fulgidus 80 d3c9fa1 not modelled 8.8 16 Fold:5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain Superfamily:5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain Family:5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 81 c2kucA_ not modelled 8.7 13 PDB header:isomerase Chain: A: PDB Molecule:putative disulphide-isomerase; PDBTitle: solution structure of a putative disulphide-isomerase from bacteroides2 thetaiotaomicron 82 d1osce_ not modelled 8.7 26 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 83 c3b6nA_ not modelled 8.7 22 PDB header:lyase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate PDBTitle: crystal structure of 2c-methyl-d-erythritol 2,4-2 cyclodiphosphate synthase pv003920 from plasmodium vivax 84 c3lorB_ not modelled 8.6 14 PDB header:isomerase Chain: B: PDB Molecule:thiol-disulfide isomerase and thioredoxins; PDBTitle: the crystal structure of a thiol-disulfide isomerase from2 corynebacterium glutamicum to 2.2a 85 d1j03a_ not modelled 8.4 39 Fold:Cytochrome b5-like heme/steroid binding domain Superfamily:Cytochrome b5-like heme/steroid binding domain Family:Steroid-binding domain 86 d1hkoa_ not modelled 8.4 36 Fold:Cytochrome b5-like heme/steroid binding domain Superfamily:Cytochrome b5-like heme/steroid binding domain Family:Cytochrome b5 87 d2zfha1 not modelled 8.4 26 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 88 c1xk8A_ not modelled 8.4 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:divalent cation tolerant protein cuta; PDBTitle: divalent cation tolerant protein cuta from homo sapiens2 o60888 89 d1ukua_ not modelled 8.4 21 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 90 c2wnyB_ not modelled 8.2 17 PDB header:unknown function Chain: B: PDB Molecule:conserved protein mth689; PDBTitle: structure of mth689, a duf54 protein from methanothermobacter2 thermautotrophicus 91 d1c9ka_ not modelled 8.2 86 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 92 c3d4oA_ not modelled 8.1 44 PDB header:oxidoreductase Chain: A: PDB Molecule:dipicolinate synthase subunit a; PDBTitle: crystal structure of dipicolinate synthase subunit a (np_243269.1)2 from bacillus halodurans at 2.10 a resolution 93 d1mhyd_ not modelled 8.0 35 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 94 d1vjpa1 not modelled 7.9 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 95 c2hw2A_ not modelled 7.9 18 PDB header:transferase Chain: A: PDB Molecule:rifampin adp-ribosyl transferase; PDBTitle: crystal structure of rifampin adp-ribosyl transferase in2 complex with rifampin 96 c3s5pA_ not modelled 7.9 22 PDB header:isomerase Chain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: crystal structure of ribose-5-phosphate isomerase b rpib from giardia2 lamblia 97 c3ga2A_ not modelled 7.8 24 PDB header:hydrolase Chain: A: PDB Molecule:endonuclease v; PDBTitle: crystal structure of the endonuclease_v (bsu36170) from2 bacillus subtilis, northeast structural genomics3 consortium target sr624 98 d1kr4a_ not modelled 7.8 11 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 99 d1mtyd_ not modelled 7.7 41 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like