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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2w42A_

Fold library idPDB HeaderMoleculeTitle
c2w42A_PDB header: protein/dna complexChain: A: PDB Molecule: putative uncharacterized protein;PDBTitle: the structure of a piwi protein from archaeoglobus fulgidus2 complexed with a 16nt dna duplex.


Added to library: Tue Mar 16 12:48:51 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LTYRIGNGASVPISNTGELIKGLRNYGPYEVPSLKYNQIALIHNNQFSSLINQLKSQISSKIDEVWHIHN
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Known secondary structure (DSSP)

GGG
SS


SB



SSSS
TT
TT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence INISEFIYDSPHFDSIKSQVDNAIDTGVDGIMLVLPEYNTPLYYKLKSYLINSIPSQFMRYDILSNRNLT
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Known secondary structure (DSSP)

SSSS

SSS

TTS
GGG

TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FYVDNLLVQFVSKLGGKPWILNVDPEKGSDIIIGTGATRIDNVNLFCFAMVFKKDGTMLWNEISPIVTSS
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Known secondary structure (DSSP) TT
B




TTSS
SSSSS
TTS



GG
 .........220.........230.........240.........250.........260.........270.........280
Sequence EYLTYLKSTIKKVVYGFKKSNPDWDVEKLTLHVSGKRPKMKDGETKILKETVEELKKQEMVSRDVKYAIL
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Known secondary structure (DSSP) G
TT


SSS

S
TTSS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence HLNETHPFWVMGYEGTKVKLSSKRYLLTLLQMVTPIKPLSVEIVSDNWTSEEYYHNVHEILDEIYYLSKM
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Known secondary structure (DSSP)





SSSSS




TTTT
 .........360.........370.........380.........390.....
Sequence NWRGFRSRNLPVTVNYPKLVAGIIANVNRYGGYPIRSLQTNPWFL
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Known secondary structure (DSSP)
TTSSS

SS
TT




S
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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