Fold library entry viewer: c1u04A_

Added to library: Tue Mar 16 14:05:07 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	X	K	A	I	V	V	I	N	L	V	K	I	N	K	K	I	I	P	D	K	I	Y	V	Y	R	L	Y	S	I	Y	R	L	A	Y	E	N	V	G	I	V	I	D	P	E	N	L	I	I	A	T	T	K	E	L	E	Y	E	G	E	F	I	P	E	G	E	I	S	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								B	S				B		G	G	G	S		S																	T	T						T	T	T	T					S	S					S	S										G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	L	R	N	D	Y	Q	S	K	L	V	L	R	L	L	K	E	N	G	I	G	E	Y	E	L	S	K	L	L	R	K	F	R	K	P	K	T	F	G	D	Y	K	V	I	P	S	V	E	X	S	V	I	K	H	D	E	D	F	Y	L	V	I	H	I	I	H	Q	I	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S																T	T		S									T	T	T	S						T	T															S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	X	K	T	L	W	E	L	V	N	K	D	P	K	E	L	E	E	F	L	X	T	H	K	E	N	L	X	L	K	D	I	A	S	P	L	K	T	V	Y	K	P	C	F	E	E	Y	T	K	K	P	K	L	D	H	N	Q	E	I	V	K	Y	W	Y	N	Y	H	I	E	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S						T	T	T												S	T	T	T						T	T	S	T	T								B		T	T	S	S		B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	W	N	T	P	E	A	K	L	E	F	Y	R	K	F	G	Q	V	D	L	K	Q	P	A	I	L	A	K	F	A	S	K	N	Y	K	I	Y	L	L	P	Q	L	V	V	P	T	Y	N	A	E	Q	L	A	K	E	I	L	E	Y	T	K	L	X	P	E	E	R	K	E	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S													S			T	T	S								S										T	T	T							G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	N	I	L	A	E	V	D	S	D	I	I	D	K	S	L	S	E	I	E	V	E	K	I	A	Q	E	L	E	N	K	I	R	V	R	D	D	K	G	N	S	V	P	I	S	Q	L	L	W	T	N	Y	S	R	K	Y	P	V	I	L	P	Y	E	V	P	E	K	F	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S	B		S	S											G	G	G	G	S	S						S	S	S					S					G	G	G	G	S									S	B			T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	R	E	I	P	X	F	I	I	L	D	S	G	L	L	A	D	I	Q	N	F	A	T	N	E	F	R	E	L	V	K	S	X	Y	Y	E	K	V	I	T	E	D	L	N	S	D	K	G	I	I	E	V	V	E	Q	V	S	S	F	X	K	G	K	E	L	G	L	A	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S																													T	T	S																T	T		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	A	R	N	K	L	S	S	E	K	F	E	E	I	K	R	R	L	F	N	L	N	V	I	S	Q	V	V	N	E	D	T	L	K	N	K	R	D	K	Y	D	R	N	R	L	D	L	F	V	R	H	N	L	L	F	Q	V	L	S	K	L	G	V	K	Y	Y	V	L	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S															T	T																	T	T																					T	T		B					S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	F	N	Y	D	Y	I	I	G	I	D	V	A	P	X	K	R	S	E	G	Y	I	G	G	S	A	V	X	F	D	S	Q	G	Y	I	R	K	I	V	P	I	K	I	G	E	Q	R	G	E	S	V	D	X	N	E	F	F	K	E	X	V	D	K	F	K	E	F	N	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S													T	T	T											T	T	S														S	S	S	S																	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	D	N	K	K	I	L	L	L	R	D	G	R	I	T	N	N	E	E	E	G	L	K	Y	I	S	E	X	F	D	I	E	V	V	T	X	D	V	I	K	N	H	P	V	R	A	F	A	N	X	K	X	Y	F	N	L	G	G	A	I	Y	L	I	P	H	K	L	K	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T								S	B																		T										S						B	S	S		S							T	T							S			S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	G	T	P	I	P	I	K	L	A	K	K	R	I	I	K	N	G	K	V	E	K	Q	S	I	T	R	Q	D	V	L	D	I	F	I	L	T	R	L	N	Y	G	S	I	S	A	D	X	R	L	P	A	P	V	H	Y	A	H	K	F	A	N	A	I	R	N	E	W	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S															T	T																				T			T	T		S	S					S																T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.
Sequence	K	E	E	F	L	A	E	G	F	L	Y	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T			T	T

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PDB structure

FASTA sequence

Hidden Markov model

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