Email l.a.kelley@imperial.ac.uk Description P0ADL3 Date Thu Jan 5 11:21:17 GMT 2012 Unique Job ID 806b7f2c4523b637

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1xn7a_ 58.5 33 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Hypothetical protein YhgG 2 d1k8kg_ 58.1 23 Fold:alpha-alpha superhelix Superfamily:Arp2/3 complex 16 kDa subunit ARPC5 Family:Arp2/3 complex 16 kDa subunit ARPC5 3 d1ylfa1 48.9 7 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Transcriptional regulator Rrf2 4 c3k69A_ 44.5 17 PDB header:transcription Chain: A: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution 5 d1vcta1 41.2 8 Fold:Spectrin repeat-like Superfamily:PhoU-like Family:PhoU-like 6 d1xqoa_ 40.8 11 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:AgoG-like 7 d2ihta1 40.5 55 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 8 c3dwlG_ 40.4 20 PDB header:structural protein Chain: G: PDB Molecule:actin-related protein 2/3 complex subunit 5; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit 9 d1s8na_ 37.1 9 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 10 d1xd7a_ 33.2 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Transcriptional regulator Rrf2 11 d1ufma_ 32.7 27 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:PCI domain (PINT motif) 12 d1t9ba1 29.9 33 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 13 d2ji7a1 29.7 21 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 14 d1q6za1 29.6 28 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 15 d1zpda1 28.0 28 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 16 d1ozha1 27.7 31 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 17 c3c3mA_ 26.1 26 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of the n-terminal domain of response regulator2 receiver protein from methanoculleus marisnigri jr1 18 c2vbgB_ 24.4 17 PDB header:lyase Chain: B: PDB Molecule:branched-chain alpha-ketoacid decarboxylase; PDBTitle: the complex structure of the branched-chain keto acid2 decarboxylase (kdca) from lactococcus lactis with 2r-1-3 hydroxyethyl-deazathdp 19 d1pvda1 23.2 10 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 20 d1p6qa_ 23.0 13 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 21 c2y75F_ not modelled 20.9 7 PDB header:transcription Chain: F: PDB Molecule:hth-type transcriptional regulator cymr; PDBTitle: the structure of cymr (yrzc) the global cysteine regulator2 of b. subtilis 22 d1u0sy_ not modelled 20.5 22 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 23 c3t6kB_ not modelled 20.4 20 PDB header:signaling protein Chain: B: PDB Molecule:response regulator receiver; PDBTitle: crystal structure of a hypothetical response regulator (caur_3799)2 from chloroflexus aurantiacus j-10-fl at 1.86 a resolution 24 d1jbea_ not modelled 19.1 13 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 25 c3h1gA_ not modelled 17.7 13 PDB header:signaling protein Chain: A: PDB Molecule:chemotaxis protein chey homolog; PDBTitle: crystal structure of chey mutant t84a of helicobacter pylori 26 d1ovma1 not modelled 17.2 17 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 27 c3c5tB_ not modelled 16.9 26 PDB header:signaling protein/signaling protein Chain: B: PDB Molecule:exendin-4; PDBTitle: crystal structure of the ligand-bound glucagon-like peptide-1 receptor2 extracellular domain 28 c3hzhA_ not modelled 16.8 21 PDB header:signaling protein Chain: A: PDB Molecule:chemotaxis response regulator (chey-3); PDBTitle: crystal structure of the chex-chey-bef3-mg+2 complex from2 borrelia burgdorferi 29 c3khtA_ not modelled 16.8 11 PDB header:signaling protein Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator from hahella chejuensis 30 d1ny5a1 not modelled 16.7 9 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 31 c1ojhK_ not modelled 16.2 19 PDB header:protein binding Chain: K: PDB Molecule:nbla; PDBTitle: crystal structure of nbla from pcc 7120 32 d2pl1a1 not modelled 16.0 15 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 33 c2qxyB_ not modelled 16.0 24 PDB header:transcription Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from thermotoga2 maritima 34 c2zwmA_ not modelled 15.9 18 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis 35 c3i42A_ not modelled 15.8 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:response regulator receiver domain protein (chey- PDBTitle: structure of response regulator receiver domain (chey-like)2 from methylobacillus flagellatus 36 c1zpdA_ not modelled 15.7 28 PDB header:alcohol fermentation Chain: A: PDB Molecule:pyruvate decarboxylase; PDBTitle: pyruvate decarboxylase from zymomonas mobilis 37 c3grcD_ not modelled 15.6 13 PDB header:transferase Chain: D: PDB Molecule:sensor protein, kinase; PDBTitle: crystal structure of a sensor protein from polaromonas sp.2 js666 38 d2fug21 not modelled 15.6 8 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:NQO2-like 39 d1ojha_ not modelled 15.5 19 Fold:NblA-like Superfamily:NblA-like Family:NblA-like 40 d1zgza1 not modelled 15.3 11 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 41 c3txmA_ not modelled 15.3 18 PDB header:hydrolase, protein binding Chain: A: PDB Molecule:26s proteasome regulatory complex subunit p42b; PDBTitle: crystal structure of rpn6 from drosophila melanogaster, gd(3+) complex 42 c3cg4A_ not modelled 15.0 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:response regulator receiver domain protein (chey-like); PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1 43 c3c97A_ not modelled 14.8 13 PDB header:signaling protein, transferase Chain: A: PDB Molecule:signal transduction histidine kinase; PDBTitle: crystal structure of the response regulator receiver domain2 of a signal transduction histidine kinase from aspergillus3 oryzae 44 c3hv2B_ not modelled 13.5 22 PDB header:signaling protein Chain: B: PDB Molecule:response regulator/hd domain protein; PDBTitle: crystal structure of signal receiver domain of hd domain-2 containing protein from pseudomonas fluorescens pf-5 45 d1mvoa_ not modelled 13.4 22 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 46 c3cf4G_ not modelled 13.3 21 PDB header:oxidoreductase Chain: G: PDB Molecule:acetyl-coa decarboxylase/synthase epsilon subunit; PDBTitle: structure of the codh component of the m. barkeri acds complex 47 d1ybha1 not modelled 13.3 30 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 48 c1jrjA_ not modelled 13.1 29 PDB header:hormone/growth factor Chain: A: PDB Molecule:exendin-4; PDBTitle: solution structure of exendin-4 in 30-vol% trifluoroethanol 49 d1ig6a_ not modelled 13.0 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:ARID-like Family:ARID domain 50 c2j48A_ not modelled 12.3 18 PDB header:transferase Chain: A: PDB Molecule:two-component sensor kinase; PDBTitle: nmr structure of the pseudo-receiver domain of the cika2 protein. 51 c3a0rB_ not modelled 12.2 18 PDB header:transferase Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360) 52 d1kgsa2 not modelled 12.1 7 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 53 c1ozhD_ not modelled 12.0 31 PDB header:lyase Chain: D: PDB Molecule:acetolactate synthase, catabolic; PDBTitle: the crystal structure of klebsiella pneumoniae acetolactate2 synthase with enzyme-bound cofactor and with an unusual3 intermediate. 54 d2ayxa1 not modelled 11.7 20 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 55 d1bgpa_ not modelled 11.6 26 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:CCP-like 56 d1ys7a2 not modelled 11.5 23 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 57 c1d0rA_ not modelled 10.9 22 PDB header:hormone/growth factor Chain: A: PDB Molecule:glucagon-like peptide-1-(7-36)-amide; PDBTitle: solution structure of glucagon-like peptide-1-(7-36)-amide2 in trifluoroethanol/water 58 d2ez9a1 not modelled 10.9 25 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 59 c3cixA_ not modelled 10.8 26 PDB header:adomet binding protein Chain: A: PDB Molecule:fefe-hydrogenase maturase; PDBTitle: x-ray structure of the [fefe]-hydrogenase maturase hyde from2 thermotoga maritima in complex with thiocyanate 60 d1yioa2 not modelled 10.6 16 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 61 c2rohA_ not modelled 10.4 18 PDB header:dna binding protein Chain: A: PDB Molecule:telomere binding protein-1; PDBTitle: the dna binding domain of rtbp1 62 c3rceA_ not modelled 10.3 26 PDB header:transferase/peptide Chain: A: PDB Molecule:oligosaccharide transferase to n-glycosylate proteins; PDBTitle: bacterial oligosaccharyltransferase pglb 63 c2qzjC_ not modelled 10.2 18 PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile 64 d2a9pa1 not modelled 10.2 23 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 65 c2rjnA_ not modelled 9.8 22 PDB header:hydrolase Chain: A: PDB Molecule:response regulator receiver:metal-dependent PDBTitle: crystal structure of an uncharacterized protein q2bku2 from2 neptuniibacter caesariensis 66 c2jrzA_ not modelled 9.7 18 PDB header:oxidoreductase Chain: A: PDB Molecule:histone demethylase jarid1c; PDBTitle: solution structure of the bright/arid domain from the human2 jarid1c protein. 67 c2ji6B_ not modelled 9.7 21 PDB header:lyase Chain: B: PDB Molecule:oxalyl-coa decarboxylase; PDBTitle: x-ray structure of oxalyl-coa decarboxylase in complex with2 3-deaza-thdp and oxalyl-coa 68 d1dbwa_ not modelled 9.5 20 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 69 c2hqoA_ not modelled 9.5 7 PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism 70 c3j08A_ not modelled 9.5 19 PDB header:hydrolase, metal transport Chain: A: PDB Molecule:copper-exporting p-type atpase a; PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa 71 d1q3ma_ not modelled 9.3 29 Fold:GLA-domain Superfamily:GLA-domain Family:GLA-domain 72 c3lwfD_ not modelled 9.2 13 PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution 73 c3gl9B_ not modelled 9.2 24 PDB header:signaling protein Chain: B: PDB Molecule:response regulator; PDBTitle: the structure of a histidine kinase-response regulator2 complex sheds light into two-component signaling and3 reveals a novel cis autophosphorylation mechanism 74 c2bpbB_ not modelled 9.1 23 PDB header:oxidoreductase Chain: B: PDB Molecule:sulfite\:cytochrome c oxidoreductase subunit b; PDBTitle: sulfite dehydrogenase from starkeya novella 75 c2jxjA_ not modelled 9.1 15 PDB header:oxidoreductase Chain: A: PDB Molecule:histone demethylase jarid1a; PDBTitle: nmr structure of the arid domain from the histone h3k42 demethylase rbp2 76 c3r0jA_ not modelled 8.8 22 PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis 77 d1w36d1 not modelled 8.8 33 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 78 c3f6cB_ not modelled 8.7 13 PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli 79 c3b2nA_ not modelled 8.7 9 PDB header:transcription Chain: A: PDB Molecule:uncharacterized protein q99uf4; PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus 80 c3hdgE_ not modelled 8.6 11 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the n-terminal domain of an2 uncharacterized protein (ws1339) from wolinella3 succinogenes 81 c2panF_ not modelled 8.6 21 PDB header:lyase Chain: F: PDB Molecule:glyoxylate carboligase; PDBTitle: crystal structure of e. coli glyoxylate carboligase 82 c1xmeB_ not modelled 8.5 6 PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: structure of recombinant cytochrome ba3 oxidase from thermus2 thermophilus 83 c1k8vA_ not modelled 8.5 43 PDB header:unknown function Chain: A: PDB Molecule:neuropeptide f; PDBTitle: the nmr-derived conformation of neuropeptide f from2 moniezia expansa 84 c3eodA_ not modelled 8.4 20 PDB header:signaling protein Chain: A: PDB Molecule:protein hnr; PDBTitle: crystal structure of n-terminal domain of e. coli rssb 85 d1heya_ not modelled 8.2 11 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 86 c3hdlA_ not modelled 8.2 19 PDB header:oxidoreductase Chain: A: PDB Molecule:royal palm tree peroxidase; PDBTitle: crystal structure of highly glycosylated peroxidase from royal palm2 tree 87 c2nxwB_ not modelled 8.2 31 PDB header:lyase Chain: B: PDB Molecule:phenyl-3-pyruvate decarboxylase; PDBTitle: crystal structure of phenylpyruvate decarboxylase of azospirillum2 brasilense 88 d1xg7a_ not modelled 8.1 7 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:AgoG-like 89 d1qh8a_ not modelled 8.1 11 Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:Nitrogenase iron-molybdenum protein 90 d1pa2a_ not modelled 8.0 26 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:CCP-like 91 d1o6ea_ not modelled 8.0 19 Fold:Herpes virus serine proteinase, assemblin Superfamily:Herpes virus serine proteinase, assemblin Family:Herpes virus serine proteinase, assemblin 92 c1hr6C_ not modelled 7.9 11 PDB header:hydrolase Chain: C: PDB Molecule:mitochondrial processing peptidase alpha subunit; PDBTitle: yeast mitochondrial processing peptidase 93 c3cg0A_ not modelled 7.6 11 PDB header:lyase Chain: A: PDB Molecule:response regulator receiver modulated diguanylate cyclase PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding 94 c3mmnA_ not modelled 7.6 14 PDB header:transferase Chain: A: PDB Molecule:histidine kinase homolog; PDBTitle: crystal structure of the receiver domain of the histidine kinase cki12 from arabidopsis thaliana complexed with mg2+ 95 d2djia1 not modelled 7.5 26 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 96 c2pgnA_ not modelled 7.5 31 PDB header:hydrolase Chain: A: PDB Molecule:cyclohexane-1,2-dione hydrolase (cdh); PDBTitle: the crystal structure of fad and thdp-dependent cyclohexane-1,2-dione2 hydrolase in complex with cyclohexane-1,2-dione 97 d1qkka_ not modelled 7.3 16 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 98 c1fp2A_ not modelled 7.3 15 PDB header:transferase Chain: A: PDB Molecule:isoflavone o-methyltransferase; PDBTitle: crystal structure analysis of isoflavone o-methyltransferase 99 d2ev0a1 not modelled 7.2 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Iron-dependent repressor protein