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Job DescriptionP00722
Confidence99.87%DateThu Jan 5 10:56:50 GMT 2012
Rank41Aligned Residues247
% Identity16%Templatec3civA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endo-beta-1,4-mannanase; PDBTitle: crystal structure of the endo-beta-1,4-mannanase from2 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   351........360.........370.........380.........390...... ...400.........
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Query Sequence  LIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNH. . . . . . . . . . . . . . . . . . . . . PLWYTLCDRYGLY
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Template Sequence  FIRGMTFGFVGQHGTW. . GTDEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLK
Template Known Secondary structure 
STT
BTTGG..GSSS
SSSTT



B
STTTB

TT
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   12.......20....... ..30.........40.........50.........60.........70.........80.........
 
   410.........420..... ....430.........440.........450.........460... ......470......
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Query Sequence  VVDEANIETHGMVPMN. . RLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNES. . . . . . . . . . . GHGANHDALYRWI
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Template Sequence  VCLKPTVNCRDGTWRGEIRFEKEHGPDLESWEAWFGSYSDMMAHYAHVAKRTGCEMFCVGCEMTTAEPHEAMWRETIARV
Template Known Secondary structure  TT


GGG


SBS

TTSSBTT
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TTTTT
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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   477..480.........490... ......500... ......510.........520.........530.........540.........
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Query Sequence  KSVDPSRPVQYEGGGAD. . . . . TTATDIICPM. YARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGG.
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Template Sequence  RTEYDGLVTYNCNHGREEHVRFWDAVDLISSSAYYPIDRWRDRVPVLREVAEAH. . . . . . EKPLFFMEVGCPSRSGSGAC
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STT
TTT
S
GGGSS



GGG......T




SBTTGGGS
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   170.........180.........190.........200.........210.........220... ......230.........240...
 
   550.........560.........570.........580.........590.........600.........610.
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Query Sequence  . . . . . . . . . . . . . . . . . . FAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFAD
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Template Sequence  PWDYRHPGAVCLDEQARFYEAMFAAMPDEPWFKGYMLWEWPWKLYPR. . . . . . . . . . . . . . . EAASEDGSYCIYG. . . . .
Template Known Secondary structure  TT
TT



B
S


TT
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G...............GGGGG

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   244.....250.........260.........270.........280.........290 .........300...
 
   612.......620........
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Query Sequence  RTPHPALTEAKHQQQFF
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Template Sequence  . . . KPAEDVVARAFSAI
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   304.....310.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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