Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	A	L	A	M	K	V	I	S	Q	V	E	A	Q	R	K	I	L	E	E	A	V	S	T	A	L	E	L	A	S	G	K	S	D	G	A	E	V	A	V	S	K	T	T	G	I	S	V	S	T	R	Y	G	E	V	E	N	V	E	F
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?																																																	?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		N	S	D	G	A	L	G	I	T	V	Y	H	Q	N	R	K	G	S	A	S	S	T	D	L	S	P	Q	A	I	A	R	T	V	Q	A	A	L	D	I	A	R	Y	T	S	P	D	P	C	A	G	V	A	D	K	E	L	L	A	F	D
Secondary structure
SS confidence
Disorder		?	?	?																																						?	?			?		?	?							?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		A	P	D	L	D	L	F	H	P	A	E	V	S	P	D	E	A	I	E	L	A	A	R	A	E	Q	A	A	L	Q	A	D	K	R	I	T	N	T	E	G	G	S	F	N	S	H	Y	G	V	K	V	F	G	N	S	H	G	M	L	Q
Secondary structure
SS confidence
Disorder										?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		G	Y	C	S	T	R	H	S	L	S	S	C	V	I	A	E	E	N	G	D	M	E	R	D	Y	A	Y	T	I	G	R	A	M	S	D	L	Q	T	P	E	W	V	G	A	D	C	A	R	R	T	L	S	R	L	S	P	R	K	L	S
Secondary structure
SS confidence
Disorder																	?	?	?	?	?	?	?	?	?	?		?	?	?	?																								?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		T	M	K	A	P	V	I	F	A	N	E	V	A	T	G	L	F	G	H	L	V	G	A	I	A	G	G	S	V	Y	R	K	S	T	F	L	L	D	S	L	G	K	Q	I	L	P	D	W	L	T	I	E	E	H	P	H	L	L	K	G
Secondary structure
SS confidence
Disorder		?																																			?
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Sequence		L	A	S	T	P	F	D	S	E	G	V	R	T	E	R	R	D	I	I	K	D	G	I	L	T	Q	W	L	L	T	S	Y	S	A	R	K	L	G	L	K	S	T	G	H	A	G	G	I	H	N	W	R	I	A	G	Q	G	L	S	F
Secondary structure
SS confidence
Disorder																																												?
Disorder confidence
		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence		E	Q	M	L	K	E	M	G	T	G	L	V	V	T	E	L	M	G	Q	G	V	S	A	I	T	G	D	Y	S	R	G	A	A	G	F	W	V	E	N	G	E	I	Q	Y	P	V	S	E	I	T	I	A	G	N	L	K	D	M	W	R
Secondary structure
SS confidence
Disorder																			?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Sequence		N	I	V	T	V	G	N	D	I	E	T	R	S	N	I	Q	C	G	S	V	L	L	P	E	M	K	I	A	G	Q
Secondary structure
SS confidence
Disorder												?		?											?	?			?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3qtd chain C Region: 9 - 450 Aligned: 439 Modelled: 442 Confidence: 100.0% Identity: 50% PDB header:gene regulation Chain: C: PDB Molecule:pmba protein; PDBTitle: crystal structure of putative modulator of gyrase (pmba) from2 pseudomonas aeruginosa pao1 Phyre2 PDB 1vpb chain A Region: 12 - 449 Aligned: 429 Modelled: 435 Confidence: 100.0% Identity: 28% Fold: Putative modulator of DNA gyrase, PmbA/TldD Superfamily: Putative modulator of DNA gyrase, PmbA/TldD Family: Putative modulator of DNA gyrase, PmbA/TldD Phyre2 PDB 1vl4 chain A Region: 18 - 448 Aligned: 421 Modelled: 426 Confidence: 100.0% Identity: 28% Fold: Putative modulator of DNA gyrase, PmbA/TldD Superfamily: Putative modulator of DNA gyrase, PmbA/TldD Family: Putative modulator of DNA gyrase, PmbA/TldD Phyre2 PDB 3onr chain I Region: 18 - 69 Aligned: 50 Modelled: 52 Confidence: 25.1% Identity: 12% PDB header:metal binding protein Chain: I: PDB Molecule:protein transport protein sece2; PDBTitle: crystal structure of the calcium chelating immunodominant antigen,2 calcium dodecin (rv0379),from mycobacterium tuberculosis with a novel3 calcium-binding site Phyre2 PDB 1o12 chain A domain 1 Region: 381 - 404 Aligned: 21 Modelled: 24 Confidence: 24.5% Identity: 29% Fold: Composite domain of metallo-dependent hydrolases Superfamily: Composite domain of metallo-dependent hydrolases Family: N-acetylglucosamine-6-phosphate deacetylase, NagA Phyre2 PDB 2ux9 chain A domain 1 Region: 18 - 68 Aligned: 49 Modelled: 51 Confidence: 23.2% Identity: 16% Fold: Dodecin subunit-like Superfamily: Dodecin-like Family: Dodecin-like Phyre2 PDB 2vxa chain L Region: 18 - 68 Aligned: 49 Modelled: 51 Confidence: 23.0% Identity: 16% PDB header:flavoprotein Chain: L: PDB Molecule:dodecin; PDBTitle: h.halophila dodecin in complex with riboflavin Phyre2 PDB 3oqt chain P Region: 18 - 68 Aligned: 49 Modelled: 51 Confidence: 22.6% Identity: 14% PDB header:flavoprotein Chain: P: PDB Molecule:rv1498a protein; PDBTitle: crystal structure of rv1498a protein from mycobacterium tuberculosis Phyre2 PDB 3gkn chain A Region: 395 - 427 Aligned: 33 Modelled: 33 Confidence: 11.9% Identity: 12% PDB header:oxidoreductase Chain: A: PDB Molecule:bacterioferritin comigratory protein; PDBTitle: insights into the alkyl peroxide reduction activity of xanthomonas2 campestris bacterioferritin comigratory protein from the trapped3 intermediate/ligand complex structures Phyre2 PDB 1xac chain A Region: 210 - 266 Aligned: 50 Modelled: 57 Confidence: 11.5% Identity: 18% Fold: Isocitrate/Isopropylmalate dehydrogenase-like Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like Family: Dimeric isocitrate & isopropylmalate dehydrogenases Phyre2 PDB 2pju chain A domain 1 Region: 75 - 103 Aligned: 29 Modelled: 29 Confidence: 9.2% Identity: 21% Fold: Chelatase-like Superfamily: PrpR receptor domain-like Family: PrpR receptor domain-like Phyre2 PDB 2d1c chain B Region: 210 - 266 Aligned: 50 Modelled: 57 Confidence: 8.9% Identity: 16% PDB header:oxidoreductase Chain: B: PDB Molecule:isocitrate dehydrogenase; PDBTitle: crystal structure of tt0538 protein from thermus thermophilus hb8 Phyre2 PDB 1pb1 chain A Region: 241 - 266 Aligned: 26 Modelled: 26 Confidence: 8.0% Identity: 15% Fold: Isocitrate/Isopropylmalate dehydrogenase-like Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like Family: Dimeric isocitrate & isopropylmalate dehydrogenases Phyre2 PDB 3ixr chain A Region: 395 - 427 Aligned: 33 Modelled: 33 Confidence: 7.6% Identity: 9% PDB header:oxidoreductase Chain: A: PDB Molecule:bacterioferritin comigratory protein; PDBTitle: crystal structure of xylella fastidiosa prxq c47s mutant Phyre2 PDB 2iv0 chain A Region: 241 - 266 Aligned: 26 Modelled: 26 Confidence: 7.2% Identity: 19% PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase; PDBTitle: thermal stability of isocitrate dehydrogenase from2 archaeoglobus fulgidus studied by crystal structure3 analysis and engineering of chimers Phyre2 PDB 1w0d chain A Region: 241 - 266 Aligned: 26 Modelled: 26 Confidence: 6.8% Identity: 19% Fold: Isocitrate/Isopropylmalate dehydrogenase-like Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like Family: Dimeric isocitrate & isopropylmalate dehydrogenases Phyre2 PDB 1hqs chain A Region: 241 - 266 Aligned: 26 Modelled: 26 Confidence: 6.7% Identity: 12% Fold: Isocitrate/Isopropylmalate dehydrogenase-like Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like Family: Dimeric isocitrate & isopropylmalate dehydrogenases Phyre2 PDB 1jjg chain A Region: 310 - 330 Aligned: 21 Modelled: 21 Confidence: 6.7% Identity: 38% Fold: OB-fold Superfamily: Nucleic acid-binding proteins Family: Cold shock DNA-binding domain-like Phyre2 PDB 1n8j chain A Region: 395 - 438 Aligned: 43 Modelled: 44 Confidence: 6.4% Identity: 23% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 3blx chain M Region: 241 - 266 Aligned: 26 Modelled: 26 Confidence: 6.4% Identity: 15% PDB header:oxidoreductase Chain: M: PDB Molecule:isocitrate dehydrogenase [nad] subunit 1; PDBTitle: yeast isocitrate dehydrogenase (apo form) Phyre2 1 c3qtdC_ 2 d1vpba_ 3 d1vl4a_ 4 c3onrI_ 5 d1o12a1 6 d2ux9a1 7 c2vxaL_ 8 c3oqtP_ 9 c3gknA_ 10 d1xaca_ 11 d2pjua1 12 c2d1cB_ 13 d1pb1a_ 14 c3ixrA_ 15 c2iv0A_ 16 d1w0da_ 17 d1hqsa_ 18 d1jjga_ 19 d1n8ja_ 20 c3blxM_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3qtdC_ 100.0 50 PDB header:gene regulation Chain: C: PDB Molecule:pmba protein; PDBTitle: crystal structure of putative modulator of gyrase (pmba) from2 pseudomonas aeruginosa pao1 2 d1vpba_ 100.0 28 Fold:Putative modulator of DNA gyrase, PmbA/TldD Superfamily:Putative modulator of DNA gyrase, PmbA/TldD Family:Putative modulator of DNA gyrase, PmbA/TldD 3 d1vl4a_ 100.0 28 Fold:Putative modulator of DNA gyrase, PmbA/TldD Superfamily:Putative modulator of DNA gyrase, PmbA/TldD Family:Putative modulator of DNA gyrase, PmbA/TldD 4 c3onrI_ 25.1 12 PDB header:metal binding protein Chain: I: PDB Molecule:protein transport protein sece2; PDBTitle: crystal structure of the calcium chelating immunodominant antigen,2 calcium dodecin (rv0379),from mycobacterium tuberculosis with a novel3 calcium-binding site 5 d1o12a1 24.5 29 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:N-acetylglucosamine-6-phosphate deacetylase, NagA 6 d2ux9a1 23.2 16 Fold:Dodecin subunit-like Superfamily:Dodecin-like Family:Dodecin-like 7 c2vxaL_ 23.0 16 PDB header:flavoprotein Chain: L: PDB Molecule:dodecin; PDBTitle: h.halophila dodecin in complex with riboflavin 8 c3oqtP_ 22.6 14 PDB header:flavoprotein Chain: P: PDB Molecule:rv1498a protein; PDBTitle: crystal structure of rv1498a protein from mycobacterium tuberculosis 9 c3gknA_ 11.9 12 PDB header:oxidoreductase Chain: A: PDB Molecule:bacterioferritin comigratory protein; PDBTitle: insights into the alkyl peroxide reduction activity of xanthomonas2 campestris bacterioferritin comigratory protein from the trapped3 intermediate/ligand complex structures 10 d1xaca_ 11.5 18 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 11 d2pjua1 9.2 21 Fold:Chelatase-like Superfamily:PrpR receptor domain-like Family:PrpR receptor domain-like 12 c2d1cB_ 8.9 16 PDB header:oxidoreductase Chain: B: PDB Molecule:isocitrate dehydrogenase; PDBTitle: crystal structure of tt0538 protein from thermus thermophilus hb8 13 d1pb1a_ 8.0 15 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 14 c3ixrA_ 7.6 9 PDB header:oxidoreductase Chain: A: PDB Molecule:bacterioferritin comigratory protein; PDBTitle: crystal structure of xylella fastidiosa prxq c47s mutant 15 c2iv0A_ 7.2 19 PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase; PDBTitle: thermal stability of isocitrate dehydrogenase from2 archaeoglobus fulgidus studied by crystal structure3 analysis and engineering of chimers 16 d1w0da_ 6.8 19 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 17 d1hqsa_ 6.7 12 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 18 d1jjga_ 6.7 38 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 19 d1n8ja_ 6.4 23 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 20 c3blxM_ 6.4 15 PDB header:oxidoreductase Chain: M: PDB Molecule:isocitrate dehydrogenase [nad] subunit 1; PDBTitle: yeast isocitrate dehydrogenase (apo form) 21 c3f7xA_ not modelled 6.2 29 PDB header:unknown function Chain: A: PDB Molecule:putative polyketide cyclase; PDBTitle: crystal structure of a putative polyketide cyclase (pp0894) from2 pseudomonas putida kt2440 at 1.24 a resolution 22 c2kilA_ not modelled 6.2 6 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: nmr structure of the h103g mutant so2144 h-nox domain from2 shewanella oneidensis in the fe(ii)co ligation state 23 c3r8wC_ not modelled 6.1 15 PDB header:oxidoreductase Chain: C: PDB Molecule:3-isopropylmalate dehydrogenase 2, chloroplastic; PDBTitle: structure of 3-isopropylmalate dehydrogenase isoform 2 from2 arabidopsis thaliana at 2.2 angstrom resolution 24 c3e8vA_ not modelled 6.1 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:possible transglutaminase-family protein; PDBTitle: crystal structure of a possible transglutaminase-family2 protein proteolytic fragment from bacteroides fragilis 25 d1a05a_ not modelled 6.1 8 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 26 c1bknA_ not modelled 5.9 15 PDB header:dna repair Chain: A: PDB Molecule:mutl; PDBTitle: crystal structure of an n-terminal 40kd fragment of e. coli2 dna mismatch repair protein mutl 27 d1ydua1 not modelled 5.9 9 Fold:At5g01610-like Superfamily:At5g01610-like Family:At5g01610-like 28 d1cm7a_ not modelled 5.9 12 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 29 c3mhsE_ not modelled 5.9 15 PDB header:hydrolase/transcription regulator/protei Chain: E: PDB Molecule:saga-associated factor 73; PDBTitle: structure of the saga ubp8/sgf11/sus1/sgf73 dub module bound to2 ubiquitin aldehyde 30 d3ckma1 not modelled 5.8 13 Fold:Periplasmic binding protein-like I Superfamily:Periplasmic binding protein-like I Family:L-arabinose binding protein-like 31 d1luza_ not modelled 5.8 22 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 32 d1ylea1 not modelled 5.7 6 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:AstA-like 33 c1tyoA_ not modelled 5.7 19 PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase; PDBTitle: isocitrate dehydrogenase from the hyperthermophile aeropyrum pernix in2 complex with etheno-nadp 34 d1wpwa_ not modelled 5.5 23 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 35 d1b25a1 not modelled 5.5 15 Fold:Aldehyde ferredoxin oxidoreductase, C-terminal domains Superfamily:Aldehyde ferredoxin oxidoreductase, C-terminal domains Family:Aldehyde ferredoxin oxidoreductase, C-terminal domains 36 c2kk4A_ not modelled 5.5 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein af_2094; PDBTitle: solution nmr structure of protein af2094 from archaeoglobus2 fulgidus. northeast structural genomics consotium (nesg)3 target gt2 37 c2op8A_ not modelled 5.5 14 PDB header:isomerase Chain: A: PDB Molecule:probable tautomerase ywhb; PDBTitle: crystal structure of ywhb- homologue of 4-oxalocrotonate tautomerase 38 d1m1ha1 not modelled 5.4 46 Fold:N-utilization substance G protein NusG, insert domain Superfamily:N-utilization substance G protein NusG, insert domain Family:N-utilization substance G protein NusG, insert domain 39 c1htrP_ not modelled 5.4 29 PDB header:aspartyl protease Chain: P: PDB Molecule:progastricsin (pro segment); PDBTitle: crystal and molecular structures of human progastricsin at 1.622 angstroms resolution 40 d1dl6a_ not modelled 5.3 17 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain 41 d1ka1a_ not modelled 5.3 18 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 42 d2q0ia1 not modelled 5.2 22 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:PqsE-like 43 d1cnza_ not modelled 5.2 12 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 44 d1yrra2 not modelled 5.2 16 Fold:TIM beta/alpha-barrel Superfamily:Metallo-dependent hydrolases Family:N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain 45 c3dbaB_ not modelled 5.2 10 PDB header:hydrolase Chain: B: PDB Molecule:cone cgmp-specific 3',5'-cyclic phosphodiesterase subunit PDBTitle: crystal structure of the cgmp-bound gaf a domain from the2 photoreceptor phosphodiesterase 6c 46 d2h6ca2 not modelled 5.1 17 Fold:Double-stranded beta-helix Superfamily:cAMP-binding domain-like Family:cAMP-binding domain 47 d1aora1 not modelled 5.1 8 Fold:Aldehyde ferredoxin oxidoreductase, C-terminal domains Superfamily:Aldehyde ferredoxin oxidoreductase, C-terminal domains Family:Aldehyde ferredoxin oxidoreductase, C-terminal domains 48 d1g2ua_ not modelled 5.1 12 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 49 c3hz4A_ not modelled 5.1 11 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure of thioredoxin from methanosarcina mazei 50 d1u55a_ not modelled 5.1 6 Fold:Ligand-binding domain in the NO signalling and Golgi transport Superfamily:Ligand-binding domain in the NO signalling and Golgi transport Family:H-NOX domain 51 c2ideE_ not modelled 5.1 25 PDB header:biosynthetic protein Chain: E: PDB Molecule:molybdenum cofactor biosynthesis protein c; PDBTitle: crystal structure of the molybdenum cofactor biosynthesis protein c2 (ttha1789) from thermus theromophilus hb8

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0