Phyre 2 alignment of P0AFK0 with c1bknA_

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Job Description | P0AFK0
Confidence | 5.94% | Date | Thu Jan 5 11:26:33 GMT 2012
Rank | 26 | Aligned Residues | 34
% Identity | 15% | Template | c1bknA_
PDB info | PDB header:dna repair | Chain: A: PDB Molecule:mutl; | PDBTitle: crystal structure of an n-terminal 40kd fragment of e. coli2 dna mismatch repair protein mutl
Resolution | 2.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | L | E | E | A | V | S | T | A | L | E | L | A | S | G | K | S | D | G | A | E | V | A | V | S | K | T | T | G | I | S | V | S | T | R | Y | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | V | K | E | L | V | E | N | S | L | D | A | . | . | . | G | A | T | R | I | D | I | D | I | E | R | G | G | A | K | L | I | R | I | R | D | N
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | T |  | S |  |  |  |  |  |  |  | T | T | T | T | S |  |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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