Phyre 2 alignment of P0AFK0 with d1yrra2

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Job Description | P0AFK0
Confidence | 5.17% | Date | Thu Jan 5 11:26:33 GMT 2012
Rank | 44 | Aligned Residues | 56
% Identity | 16% | Template | d1yrra2
SCOP info | TIM beta/alpha-barrel | Metallo-dependent hydrolases | N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
Resolution | 2.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 364 | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | K | E | M | G | T | G | L | V | V | T | E | L | M | G | Q | G | V | S | A | I | T | G | D | Y | S | R | G | A | A | G | F | W | V | E | N | G | E | I | Q | Y | P | V | S | E | I | T | I | A | G | N | L | K | D | M | W | R | N | I | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | K | G | . | D | K | L | C | L | V | T | D | A | T | A | P | A | G | A | N | . | I | E | Q | F | I | F | A | G | K | T | I | Y | Y | R | N | G | L | C | V | D | . | . | E | N | G | T | L | S | G | S | S | L | T | M | I | E | G | V | R
Template Known Secondary structure |  |  |  | G | . | G | G |  |  |  |  |  |  | B |  | T | T | T | T | S |  | . |  | S |  |  |  |  | T | T |  |  |  |  |  |  | S | S |  |  |  |  | . | . | T | T |  |  |  |  |  | B |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 263 | . | . |  | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . |  | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . |  |  | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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