Phyre 2 Results for P0AFK0

Email | l.a.kelley@imperial.ac.uk
Description | P0AFK0
Date | Thu Jan 5 11:26:33 GMT 2012
Unique Job ID | 74ac3b25541de69b

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3qtdC_ |
|  | 100.0 | 50 | PDB header:gene regulation Chain: C: PDB Molecule:pmba protein; PDBTitle: crystal structure of putative modulator of gyrase (pmba) from2 pseudomonas aeruginosa pao1
2 | d1vpba_ |
|  | 100.0 | 28 | Fold:Putative modulator of DNA gyrase, PmbA/TldD Superfamily:Putative modulator of DNA gyrase, PmbA/TldD Family:Putative modulator of DNA gyrase, PmbA/TldD
3 | d1vl4a_ |
|  | 100.0 | 28 | Fold:Putative modulator of DNA gyrase, PmbA/TldD Superfamily:Putative modulator of DNA gyrase, PmbA/TldD Family:Putative modulator of DNA gyrase, PmbA/TldD
4 | c3onrI_ |
|  | 25.1 | 12 | PDB header:metal binding protein Chain: I: PDB Molecule:protein transport protein sece2; PDBTitle: crystal structure of the calcium chelating immunodominant antigen,2 calcium dodecin (rv0379),from mycobacterium tuberculosis with a novel3 calcium-binding site
5 | d1o12a1 |
|  | 24.5 | 29 | Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:N-acetylglucosamine-6-phosphate deacetylase, NagA
6 | d2ux9a1 |
|  | 23.2 | 16 | Fold:Dodecin subunit-like Superfamily:Dodecin-like Family:Dodecin-like
7 | c2vxaL_ |
|  | 23.0 | 16 | PDB header:flavoprotein Chain: L: PDB Molecule:dodecin; PDBTitle: h.halophila dodecin in complex with riboflavin
8 | c3oqtP_ |
|  | 22.6 | 14 | PDB header:flavoprotein Chain: P: PDB Molecule:rv1498a protein; PDBTitle: crystal structure of rv1498a protein from mycobacterium tuberculosis
9 | c3gknA_ |
|  | 11.9 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:bacterioferritin comigratory protein; PDBTitle: insights into the alkyl peroxide reduction activity of xanthomonas2 campestris bacterioferritin comigratory protein from the trapped3 intermediate/ligand complex structures
10 | d1xaca_ |
|  | 11.5 | 18 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
11 | d2pjua1 |
|  | 9.2 | 21 | Fold:Chelatase-like Superfamily:PrpR receptor domain-like Family:PrpR receptor domain-like
12 | c2d1cB_ |
|  | 8.9 | 16 | PDB header:oxidoreductase Chain: B: PDB Molecule:isocitrate dehydrogenase; PDBTitle: crystal structure of tt0538 protein from thermus thermophilus hb8
13 | d1pb1a_ |
|  | 8.0 | 15 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
14 | c3ixrA_ |
|  | 7.6 | 9 | PDB header:oxidoreductase Chain: A: PDB Molecule:bacterioferritin comigratory protein; PDBTitle: crystal structure of xylella fastidiosa prxq c47s mutant
15 | c2iv0A_ |
|  | 7.2 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase; PDBTitle: thermal stability of isocitrate dehydrogenase from2 archaeoglobus fulgidus studied by crystal structure3 analysis and engineering of chimers
16 | d1w0da_ |
|  | 6.8 | 19 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
17 | d1hqsa_ |
|  | 6.7 | 12 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
18 | d1jjga_ |
|  | 6.7 | 38 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like
19 | d1n8ja_ |
|  | 6.4 | 23 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
20 | c3blxM_ |
|  | 6.4 | 15 | PDB header:oxidoreductase Chain: M: PDB Molecule:isocitrate dehydrogenase [nad] subunit 1; PDBTitle: yeast isocitrate dehydrogenase (apo form)
21 | c3f7xA_ |
| not modelled | 6.2 | 29 | PDB header:unknown function Chain: A: PDB Molecule:putative polyketide cyclase; PDBTitle: crystal structure of a putative polyketide cyclase (pp0894) from2 pseudomonas putida kt2440 at 1.24 a resolution
22 | c2kilA_ |
| not modelled | 6.2 | 6 | PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: nmr structure of the h103g mutant so2144 h-nox domain from2 shewanella oneidensis in the fe(ii)co ligation state
23 | c3r8wC_ |
| not modelled | 6.1 | 15 | PDB header:oxidoreductase Chain: C: PDB Molecule:3-isopropylmalate dehydrogenase 2, chloroplastic; PDBTitle: structure of 3-isopropylmalate dehydrogenase isoform 2 from2 arabidopsis thaliana at 2.2 angstrom resolution
24 | c3e8vA_ |
| not modelled | 6.1 | 19 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:possible transglutaminase-family protein; PDBTitle: crystal structure of a possible transglutaminase-family2 protein proteolytic fragment from bacteroides fragilis
25 | d1a05a_ |
| not modelled | 6.1 | 8 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
26 | c1bknA_ |
| not modelled | 5.9 | 15 | PDB header:dna repair Chain: A: PDB Molecule:mutl; PDBTitle: crystal structure of an n-terminal 40kd fragment of e. coli2 dna mismatch repair protein mutl
27 | d1ydua1 |
| not modelled | 5.9 | 9 | Fold:At5g01610-like Superfamily:At5g01610-like Family:At5g01610-like
28 | d1cm7a_ |
| not modelled | 5.9 | 12 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
29 | c3mhsE_ |
| not modelled | 5.9 | 15 | PDB header:hydrolase/transcription regulator/protei Chain: E: PDB Molecule:saga-associated factor 73; PDBTitle: structure of the saga ubp8/sgf11/sus1/sgf73 dub module bound to2 ubiquitin aldehyde
30 | d3ckma1 |
| not modelled | 5.8 | 13 | Fold:Periplasmic binding protein-like I Superfamily:Periplasmic binding protein-like I Family:L-arabinose binding protein-like
31 | d1luza_ |
| not modelled | 5.8 | 22 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like
32 | d1ylea1 |
| not modelled | 5.7 | 6 | Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:AstA-like
33 | c1tyoA_ |
| not modelled | 5.7 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase; PDBTitle: isocitrate dehydrogenase from the hyperthermophile aeropyrum pernix in2 complex with etheno-nadp
34 | d1wpwa_ |
| not modelled | 5.5 | 23 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
35 | d1b25a1 |
| not modelled | 5.5 | 15 | Fold:Aldehyde ferredoxin oxidoreductase, C-terminal domains Superfamily:Aldehyde ferredoxin oxidoreductase, C-terminal domains Family:Aldehyde ferredoxin oxidoreductase, C-terminal domains
36 | c2kk4A_ |
| not modelled | 5.5 | 15 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein af_2094; PDBTitle: solution nmr structure of protein af2094 from archaeoglobus2 fulgidus. northeast structural genomics consotium (nesg)3 target gt2
37 | c2op8A_ |
| not modelled | 5.5 | 14 | PDB header:isomerase Chain: A: PDB Molecule:probable tautomerase ywhb; PDBTitle: crystal structure of ywhb- homologue of 4-oxalocrotonate tautomerase
38 | d1m1ha1 |
| not modelled | 5.4 | 46 | Fold:N-utilization substance G protein NusG, insert domain Superfamily:N-utilization substance G protein NusG, insert domain Family:N-utilization substance G protein NusG, insert domain
39 | c1htrP_ |
| not modelled | 5.4 | 29 | PDB header:aspartyl protease Chain: P: PDB Molecule:progastricsin (pro segment); PDBTitle: crystal and molecular structures of human progastricsin at 1.622 angstroms resolution
40 | d1dl6a_ |
| not modelled | 5.3 | 17 | Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain
41 | d1ka1a_ |
| not modelled | 5.3 | 18 | Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like
42 | d2q0ia1 |
| not modelled | 5.2 | 22 | Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:PqsE-like
43 | d1cnza_ |
| not modelled | 5.2 | 12 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
44 | d1yrra2 |
| not modelled | 5.2 | 16 | Fold:TIM beta/alpha-barrel Superfamily:Metallo-dependent hydrolases Family:N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
45 | c3dbaB_ |
| not modelled | 5.2 | 10 | PDB header:hydrolase Chain: B: PDB Molecule:cone cgmp-specific 3',5'-cyclic phosphodiesterase subunit PDBTitle: crystal structure of the cgmp-bound gaf a domain from the2 photoreceptor phosphodiesterase 6c
46 | d2h6ca2 |
| not modelled | 5.1 | 17 | Fold:Double-stranded beta-helix Superfamily:cAMP-binding domain-like Family:cAMP-binding domain
47 | d1aora1 |
| not modelled | 5.1 | 8 | Fold:Aldehyde ferredoxin oxidoreductase, C-terminal domains Superfamily:Aldehyde ferredoxin oxidoreductase, C-terminal domains Family:Aldehyde ferredoxin oxidoreductase, C-terminal domains
48 | d1g2ua_ |
| not modelled | 5.1 | 12 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
49 | c3hz4A_ |
| not modelled | 5.1 | 11 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure of thioredoxin from methanosarcina mazei
50 | d1u55a_ |
| not modelled | 5.1 | 6 | Fold:Ligand-binding domain in the NO signalling and Golgi transport Superfamily:Ligand-binding domain in the NO signalling and Golgi transport Family:H-NOX domain
51 | c2ideE_ |
| not modelled | 5.1 | 25 | PDB header:biosynthetic protein Chain: E: PDB Molecule:molybdenum cofactor biosynthesis protein c; PDBTitle: crystal structure of the molybdenum cofactor biosynthesis protein c2 (ttha1789) from thermus theromophilus hb8