Return to main results Retrieve Phyre Job Id

Job DescriptionP76193
Confidence86.27%DateThu Jan 5 12:20:20 GMT 2012
Rank11Aligned Residues108
% Identity19%Templatec1y5iA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:respiratory nitrate reductase 1 alpha chain; PDBTitle: the crystal structure of the narghi mutant nari-k86a
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140. ........150.........160.........170.........180.........190.....
Predicted Secondary structure 








........








































.
Query SS confidence 
















. . . . . . . .





















































.
Query Sequence  GLQGLETPVMETRVGQK. . . . . . . . IPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGT.
Query Conservation 
  
  

 
   
  
........   
 
  
 

       
      

 

 



  
  
   
  
 



.
Alig confidence 
















........





















.........






















.
Template Conservation     
  
 


 
 
         

 

                  .........      


 
 
 
     

  
Template Sequence  ELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQK. . . . . . . . . SNGNQEKALNFLTPHQKWGIHSTY
Template Known Secondary structure 



SSTTSSB




STT
SS










STTTTTTT.........

SS



B
SSSBTTBT
Template Predicted Secondary structure 







































.........

















Template SS confidence 















































































   1031........1040.........1050.........1060.........1070....... ..1080.........1090.........1100.
 
   196...200.........210.........220.........230.........240.........250.
Predicted Secondary structure  .































Query SS confidence  .























































Query Sequence  . SAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYSVEPNGMRYVEV
Query Conservation  .  
  

   






   
   

  
  



 

  
 
      
   

 
Alig confidence  .
























..











........








Template Conservation    
   
        
 


 

  
..





 
 
 
........ 

 
   
Template Sequence  SDNLLMLTLGRGGPVVWLSEADAKDL. . GIADNDWIEVFN. . . . . . . . SNGALTARA
Template Known Secondary structure  TT
TTSS
..T

TT
........TT
Template Predicted Secondary structure 






..






........

Template SS confidence 
























































   1102.......1110.........1120....... ..1130......... 1140........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions