11 c1y5iA_ Probab=86.27   E-value=1.9  Score=21.44  Aligned_columns=108  Identities=19%

Q ss_pred             CCCCCCCCCEEEEEEEE--------EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCC-
Q ss_conf             78987675248999999--------950321367000314544575333322789888750079996457870442677-
Q batch____       125 GLQGLETPVMETRVGQK--------IPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGT-  195 (334)
Q Consensus       125 G~~g~~TP~G~~~I~~K--------~~~p~w~~p~si~~~~~~~G~~~~~~vp~Gp~NplG~~a~~l~~~g~~y~IHGT-  195 (334)
                      ....+.||+|...+-..        ..-|.|.++.............         +....+|-+.|.....-+.+|++ 
T Consensus      1031 ~~~p~~T~SGr~e~y~~~~~~~~~ge~lP~~~~~~~~~~~~~~~~~~---------~~~~~~yPl~l~t~h~~~~~HS~~ 1101 (1244)
T c1y5iA_        1031 ELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQK---------SNGNQEKALNFLTPHQKWGIHSTY 1101 (1244)
T ss_dssp             HCCCCSSTTSSBCCCCCSHHHHHTTCSSCCCCCCCCCCCSTTTTTTT---------CCSSCCEEEEEECCBCSSSBTTBT
T ss_pred             CCCCCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC---------CCCCCCCCEEEECCCCCCEECCCC
T ss_conf             36776889864585144122101356685534775555566311134---------566566768996687431257634


Q ss_pred             -CCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEE
Q ss_conf             -66200122245670126877999999858888559998185203625776146873
Q batch____       196 -SAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYSVEPNGMRYVEV  251 (334)
Q Consensus       196 -~~p~~iG~~~ShGCIRL~~~D~~~Lf~~V~~GTpV~Iv~~p~k~~~~~~g~~~le~  251 (334)
                       +..+.+-....+-+|-|+++||+++  =+.-|+-|.|.|        ..|.+.+.+
T Consensus      1102 ~~n~~~L~~~~~~~~V~INP~DA~~l--GIkdGD~V~V~N--------~rG~v~~~A 1148 (1244)
T c1y5iA_        1102 SDNLLMLTLGRGGPVVWLSEADAKDL--GIADNDWIEVFN--------SNGALTARA 1148 (1244)
T ss_dssp             TTCHHHHHHTTSSCEEEEEHHHHHHH--TCCTTCEEEEEE--------TTEEEEEEE
T ss_pred             CCHHHHHHHHCCCCEEEECHHHHHHH--CCCCCCEEEEEC--------CCEEEEEEE
T ss_conf             77079999738998899878999873--674288899980--------893899999