Return to main results Retrieve Phyre Job Id

Job DescriptionP33195
Confidence96.99%DateThu Jan 5 11:51:15 GMT 2012
Rank234Aligned Residues286
% Identity9%Templated2hoxa1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130.........140.........150.........160.........170. ........180...
Predicted Secondary structure 

























.......




Query SS confidence 




























































. . . . . . .











Query Sequence  AYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAMAKRVSKLKNAN. . . . . . . RFFVASDVHPQT
Query Conservation 











 










 













 


 


 


 
   
    .......



    

  
Alig confidence 























....
































.......











Template Conservation              
   
  
    ....
        

 
 
    
  
  

  


 
    
  
    
 
   
Template Sequence  FFNPVSNFISFELEKTIKELHEVV. . . . GNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVF
Template Known Secondary structure  S
SS

TT

....T
B

TT
SS

TTT
TTS


SS

Template Predicted Secondary structure 









....
























Template SS confidence 















































































   93......100.........110...... ...120.........130.........140.........150.........160........
 
   184.....190.........200.........210.........220 .........230.........240.........250.........260..
Predicted Secondary structure 













.












Query SS confidence 




































.









































Query Sequence  LDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQQV. GTTGEIHDYTALISELKSRKIVVSVAADIMALVLLTAPGKQG
Query Conservation    

 

    
 

             



 

 
.
  
 


   
    
  


 

 


 

 

  


 
Alig confidence 




































.







.......


























Template Conservation                  
                
  
 



 
  .......
       
 

 
             
Template Sequence  REQTKYFDKKGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRH. . . . . . . AVIKGCKSIYDMVYYWPHYTPIKYKAD
Template Known Secondary structure  S

TTGGGGTT
S
GGGSS
TTT




.......
SSTT

TT
STTTS


S
B
Template Predicted Secondary structure 























.......


















Template SS confidence 















































































   169170.........180.........190.........200.........210.... .....220.........230.........240.
 
   263......270.........280...... ...290.........300.........310.........320.........330.........340.
Predicted Secondary structure 

















.






















Query SS confidence 























.






















































Query Sequence  ADIVFGSAQRFGVPMGYGGPHAAF. FAAKDEYKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLL
Query Conservation 





  
 

 
  



 

 . 
 
  
 
 






 
 
  
     
























 
Alig confidence 





...














.










............................















Template Conservation    
   ...
 

  
  




  
     
   
............................           
   
Template Sequence  EDILLF. . . TMSKFTGHSGSRFGWALIKDESVYNNL. . . . . . . . . . . . . . . . . . . . . . . . . . . . LNYMTKNTEGTPRETQ
Template Known Secondary structure 
S...TS
GGG



............................TSS

Template Predicted Secondary structure 
...












............................






Template SS confidence 















































































   242..... ..250.........260.........270.... .....280.........290
 
   342.......350. ........360.........370......... 380.........390.....
Predicted Secondary structure  .........


.................









Query SS confidence 









. . . . . . . . .



























. . . . . . . . . . . . . . . . .















Query Sequence  ANIASLYAVY. . . . . . . . . HGPVGLKRIANRIHRLTDILAAGLQQKG. . . . . . . . . . . . . . . . . LKLRHAHYFDTLCVEV
Query Conservation 
  
  
   ......... 
  

  

      
  
   
   
.................       


   
  
Alig confidence 









.........



























.................















Template Conservation   

   
                     
  
  
   
   
       
   
                 
 
     
Template Sequence  LRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW
Template Known Secondary structure  TTSTTSTTSSS




S
TTTT



S
S
Template Predicted Secondary structure 































Template SS confidence 















































































   291........300.........310.........320.........330.........340.........350.........360.........370
 
   396...400.........410.... .....420.........430.........440
Predicted Secondary structure 





.....







Query SS confidence 


















. . . . .

























Query Sequence  ADKAGVLTRAEAAEINLRS. . . . . DILNAVGITLDETTTRENVMQLFNVL
Query Conservation           
     


 .....       

 

  
      
    
Alig confidence 


















.....









..













Template Conservation          

 
 

 
 


 

     




..    
 

  
 

Template Sequence  EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSL. . IKTQDDFDQLMYYL
Template Known Secondary structure  GGG
STT
GGGGTS
TT
..SS
Template Predicted Secondary structure 













..


Template SS confidence 

















































   371........380.........390.........400.... .....410........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions