Email l.a.kelley@imperial.ac.uk Description P33218 Date Thu Jan 5 11:51:18 GMT 2012 Unique Job ID 6d085e027ad2de6c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2ou3a1 99.6 17 Fold:TerB-like Superfamily:TerB-like Family:COG3793-like 2 c2jxuA_ 98.7 9 PDB header:unknown function Chain: A: PDB Molecule:terb; PDBTitle: nmr solution structure of kp-terb, a tellurite resistance2 protein from klebsiella pneumoniae 3 d1z67a1 86.5 18 Fold:YidB-like Superfamily:YidB-like Family:YidB-like 4 c3hugJ_ 56.3 23 PDB header:transcription/membrane protein Chain: J: PDB Molecule:probable conserved membrane protein; PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl 5 d1aisb2 56.1 8 Fold:Cyclin-like Superfamily:Cyclin-like Family:Transcription factor IIB (TFIIB), core domain 6 d1ln4a_ 47.6 30 Fold:IF3-like Superfamily:YhbY-like Family:YhbY-like 7 d2p7vb1 42.1 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 8 d1yzma1 39.3 25 Fold:Long alpha-hairpin Superfamily:Rabenosyn-5 Rab-binding domain-like Family:Rabenosyn-5 Rab-binding domain-like 9 d1z0kb1 38.9 25 Fold:Long alpha-hairpin Superfamily:Rabenosyn-5 Rab-binding domain-like Family:Rabenosyn-5 Rab-binding domain-like 10 d1ku7a_ 37.5 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 11 c3fymA_ 36.9 7 PDB header:dna binding protein Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: the 1a structure of ymfm, a putative dna-binding membrane2 protein from staphylococcus aureus 12 c3ol4B_ 35.3 6 PDB header:unknown function Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium smegmatis, an ortholog of rv0543c 13 d1rq8a_ 34.9 25 Fold:IF3-like Superfamily:YhbY-like Family:YhbY-like 14 c2iv1J_ 34.4 10 PDB header:lyase Chain: J: PDB Molecule:cyanate hydratase; PDBTitle: site directed mutagenesis of key residues involved in the2 catalytic mechanism of cyanase 15 d1ttya_ 33.9 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 16 d1z0jb1 33.4 42 Fold:Long alpha-hairpin Superfamily:Rabenosyn-5 Rab-binding domain-like Family:Rabenosyn-5 Rab-binding domain-like 17 d1jo0a_ 33.2 25 Fold:IF3-like Superfamily:YhbY-like Family:YhbY-like 18 c3obkH_ 32.9 20 PDB header:lyase Chain: H: PDB Molecule:delta-aminolevulinic acid dehydratase; PDBTitle: crystal structure of delta-aminolevulinic acid dehydratase2 (porphobilinogen synthase) from toxoplasma gondii me49 in complex3 with the reaction product porphobilinogen 19 d1ctda_ 32.4 33 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 20 d1vkeb_ 32.4 11 Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like 21 c2l27B_ not modelled 32.2 12 PDB header:membrane protein, peptide binding protei Chain: B: PDB Molecule:peptide agonist; PDBTitle: nmr structure of the ecd1 of crf-r1 in complex with a peptide agonist 22 c2rmfA_ not modelled 30.6 21 PDB header:hormone Chain: A: PDB Molecule:urocortin; PDBTitle: human urocortin 1 23 c3m3hA_ not modelled 30.6 20 PDB header:transferase Chain: A: PDB Molecule:orotate phosphoribosyltransferase; PDBTitle: 1.75 angstrom resolution crystal structure of an orotate2 phosphoribosyltransferase from bacillus anthracis str. 'ames3 ancestor' 24 d1msza_ not modelled 30.5 6 Fold:IF3-like Superfamily:R3H domain Family:R3H domain 25 c1mszA_ not modelled 30.5 6 PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding protein smubp-2; PDBTitle: solution structure of the r3h domain from human smubp-2 26 c2wusR_ not modelled 30.5 9 PDB header:structural protein Chain: R: PDB Molecule:putative uncharacterized protein; PDBTitle: bacterial actin mreb assembles in complex with cell shape2 protein rodz 27 d1dwka1 not modelled 26.2 15 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Cyanase N-terminal domain 28 d1vola2 not modelled 24.6 11 Fold:Cyclin-like Superfamily:Cyclin-like Family:Transcription factor IIB (TFIIB), core domain 29 d2gyqa1 not modelled 23.9 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:YciF-like 30 d1d5ya1 not modelled 22.5 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator 31 c3t72o_ not modelled 22.4 18 PDB header:transcription/dna Chain: O: PDB Molecule:pho box dna (strand 1); PDBTitle: phob(e)-sigma70(4)-(rnap-betha-flap-tip-helix)-dna transcription2 activation sub-complex 32 c2k29A_ not modelled 22.2 26 PDB header:transcription Chain: A: PDB Molecule:antitoxin relb; PDBTitle: structure of the dbd domain of e. coli antitoxin relb 33 c3oi8B_ not modelled 21.8 22 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of functionally unknown conserved protein domain2 from neisseria meningitidis mc58 34 d1ku3a_ not modelled 20.4 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 35 d1ufma_ not modelled 19.4 27 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:PCI domain (PINT motif) 36 c2k9lA_ not modelled 18.5 8 PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: structure of the core binding domain of sigma54 37 c3beyC_ not modelled 18.1 19 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:conserved protein o27018; PDBTitle: crystal structure of the protein o27018 from methanobacterium2 thermoautotrophicum. northeast structural genomics consortium target3 tt217 38 c2a6eF_ not modelled 17.8 18 PDB header:transferase Chain: F: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: crystal structure of the t. thermophilus rna polymerase2 holoenzyme 39 c1p8cD_ not modelled 17.7 10 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of tm1620 (apc4843) from thermotoga2 maritima 40 c3hjlA_ not modelled 16.1 11 PDB header:proton transport Chain: A: PDB Molecule:flagellar motor switch protein flig; PDBTitle: the structure of full-length flig from aquifex aeolicus 41 d2gtia2 not modelled 16.0 9 Fold:EndoU-like Superfamily:EndoU-like Family:Nsp15 C-terminal domain-like 42 c2zetD_ not modelled 15.2 10 PDB header:signaling protein Chain: D: PDB Molecule:melanophilin; PDBTitle: crystal structure of the small gtpase rab27b complexed with2 the slp homology domain of slac2-a/melanophilin 43 d1hqva_ not modelled 15.1 11 Fold:EF Hand-like Superfamily:EF-hand Family:Penta-EF-hand proteins 44 c2i7aA_ not modelled 14.5 13 PDB header:hydrolase Chain: A: PDB Molecule:calpain 13; PDBTitle: domain iv of human calpain 13 45 d1l6sa_ not modelled 14.3 23 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) 46 d1vola1 not modelled 13.6 6 Fold:Cyclin-like Superfamily:Cyclin-like Family:Transcription factor IIB (TFIIB), core domain 47 d1bl0a1 not modelled 13.1 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator 48 c1l9uH_ not modelled 13.1 24 PDB header:transcription Chain: H: PDB Molecule:sigma factor siga; PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution 49 d2c1ha1 not modelled 12.9 29 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) 50 d1w8ia_ not modelled 12.7 37 Fold:PIN domain-like Superfamily:PIN domain-like Family:PIN domain 51 c1y66D_ not modelled 12.4 20 PDB header:de novo protein Chain: D: PDB Molecule:engrailed homeodomain; PDBTitle: dioxane contributes to the altered conformation and2 oligomerization state of a designed engrailed homeodomain3 variant 52 c2rhbD_ not modelled 11.7 27 PDB header:viral protein Chain: D: PDB Molecule:uridylate-specific endoribonuclease; PDBTitle: crystal structure of nsp15-h234a mutant- hexamer in2 asymmetric unit 53 d1h7na_ not modelled 11.5 29 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) 54 d1ojra_ not modelled 11.3 13 Fold:AraD/HMP-PK domain-like Superfamily:AraD/HMP-PK domain-like Family:AraD-like aldolase/epimerase 55 c2ib1A_ not modelled 11.0 11 PDB header:apoptosis Chain: A: PDB Molecule:death domain containing membrane protein nradd; PDBTitle: solution structure of p45 death domain 56 d2e74g1 not modelled 11.0 20 Fold:Single transmembrane helix Superfamily:PetG subunit of the cytochrome b6f complex Family:PetG subunit of the cytochrome b6f complex 57 d2q0ta1 not modelled 10.9 23 Fold:AhpD-like Superfamily:AhpD-like Family:AhpD 58 d1lmb3_ not modelled 10.7 16 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 59 d1bi5a2 not modelled 10.7 15 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 60 d2ozka2 not modelled 10.6 27 Fold:EndoU-like Superfamily:EndoU-like Family:Nsp15 C-terminal domain-like 61 c1vf5G_ not modelled 10.5 20 PDB header:photosynthesis Chain: G: PDB Molecule:protein pet g; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus 62 d1vf5g_ not modelled 10.5 20 Fold:Single transmembrane helix Superfamily:PetG subunit of the cytochrome b6f complex Family:PetG subunit of the cytochrome b6f complex 63 d2cyya1 not modelled 10.4 8 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 64 d1mkma1 not modelled 10.2 8 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Transcriptional regulator IclR, N-terminal domain 65 c2lfcA_ not modelled 9.9 13 PDB header:oxidoreductase Chain: A: PDB Molecule:fumarate reductase, flavoprotein subunit; PDBTitle: solution nmr structure of fumarate reductase flavoprotein subunit from2 lactobacillus plantarum, northeast structural genomics consortium3 target lpr145j 66 c3bh1A_ not modelled 9.8 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0371 protein dip2346; PDBTitle: crystal structure of protein dip2346 from corynebacterium diphtheriae 67 d2h85a2 not modelled 9.8 27 Fold:EndoU-like Superfamily:EndoU-like Family:Nsp15 C-terminal domain-like 68 d2hf5a1 not modelled 9.8 29 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 69 d1ngra_ not modelled 9.6 15 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 70 c2ev2B_ not modelled 9.6 15 PDB header:lyase Chain: B: PDB Molecule:hypothetical protein rv1264/mt1302; PDBTitle: structure of rv1264n, the regulatory domain of the mycobacterial2 adenylyl cylcase rv1264, at ph 8.5 71 d2p90a1 not modelled 9.6 21 Fold:Phosphorylase/hydrolase-like Superfamily:Cgl1923-like Family:Cgl1923-like 72 c2of5K_ not modelled 9.5 15 PDB header:apoptosis Chain: K: PDB Molecule:leucine-rich repeat and death domain-containing PDBTitle: oligomeric death domain complex 73 d1rp3a1 not modelled 9.3 8 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma3 domain 74 d2tpta1 not modelled 9.2 21 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 75 c1ichA_ not modelled 9.1 15 PDB header:apoptosis Chain: A: PDB Molecule:tumor necrosis factor receptor-1; PDBTitle: solution structure of the tumor necrosis factor receptor-12 death domain 76 d1icha_ not modelled 9.1 15 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 77 d1tw3a1 not modelled 8.9 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Plant O-methyltransferase, N-terminal domain 78 d2bida_ not modelled 8.8 25 Fold:Toxins' membrane translocation domains Superfamily:Bcl-2 inhibitors of programmed cell death Family:Bcl-2 inhibitors of programmed cell death 79 d1o17a1 not modelled 8.8 19 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 80 c2gtiA_ not modelled 8.5 9 PDB header:viral protein Chain: A: PDB Molecule:replicase polyprotein 1ab; PDBTitle: mutation of mhv coronavirus non-structural protein nsp15 (f307l) 81 d1khda1 not modelled 8.5 9 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 82 c1wxpA_ not modelled 8.2 25 PDB header:transport protein Chain: A: PDB Molecule:tho complex subunit 1; PDBTitle: solution structure of the death domain of nuclear matrix2 protein p84 83 d2ofya1 not modelled 8.2 15 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 84 c2cpmA_ not modelled 8.2 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sperm-associated antigen 7; PDBTitle: solution structure of the r3h domain of human sperm-2 associated antigen 7 85 c2p90B_ not modelled 8.1 21 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein cgl1923; PDBTitle: the crystal structure of a protein of unknown function from2 corynebacterium glutamicum atcc 13032 86 c2wvsD_ not modelled 7.9 24 PDB header:hydrolase Chain: D: PDB Molecule:alpha-l-fucosidase; PDBTitle: crystal structure of an alpha-l-fucosidase gh29 trapped2 covalent intermediate from bacteroides thetaiotaomicron in3 complex with 2-fluoro-fucosyl fluoride using an e288q4 mutant 87 c1gpmD_ not modelled 7.9 14 PDB header:transferase (glutamine amidotransferase) Chain: D: PDB Molecule:gmp synthetase; PDBTitle: escherichia coli gmp synthetase complexed with amp and pyrophosphate 88 c2z2sD_ not modelled 7.9 11 PDB header:transcription Chain: D: PDB Molecule:anti-sigma factor chrr, transcriptional activator chrr; PDBTitle: crystal structure of rhodobacter sphaeroides sige in complex with the2 anti-sigma chrr 89 d2gf5a1 not modelled 7.8 30 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 90 c3omtA_ not modelled 7.8 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: putative antitoxin component, chu_2935 protein, from xre family from2 prevotella buccae. 91 c2vn2B_ not modelled 7.7 15 PDB header:replication Chain: B: PDB Molecule:chromosome replication initiation protein; PDBTitle: crystal structure of the n-terminal domain of dnad protein2 from geobacillus kaustophilus hta426 92 d1brwa1 not modelled 7.7 17 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 93 d1or7a1 not modelled 7.7 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 94 d1t07a_ not modelled 7.7 14 Fold:YggX-like Superfamily:YggX-like Family:YggX-like 95 d1u0ua2 not modelled 7.7 20 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 96 c3t98A_ not modelled 7.6 33 PDB header:protein transport Chain: A: PDB Molecule:nuclear pore complex protein nup54; PDBTitle: molecular architecture of the transport channel of the nuclear pore2 complex: nup54/nup58 97 d1ee0a2 not modelled 7.6 25 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 98 c2yqfA_ not modelled 7.6 15 PDB header:protein binding Chain: A: PDB Molecule:ankyrin-1; PDBTitle: solution structure of the death domain of ankyrin-1 99 c3e35A_ not modelled 7.5 11 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein sco1997; PDBTitle: actinobacteria-specific protein of unknown function, sco1997