PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d2bida_

Fold library id	Fold	Superfamily	Family
d2bida_	Toxins' membrane translocation domains	Bcl-2 inhibitors of programmed cell death	Bcl-2 inhibitors of programmed cell death

Links to external resources
Added to library: Tue Mar 16 14:38:09 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G S M D C E V N N G S S L R D E C I T N L L V F G F L Q S C S D N S F R R E L D A L G H E L P V L A P Q W E G Y D E L Q T D G N R S S H S R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S
T T S
S S S G G G
S
S S
S
S S
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L G R I E A D S E S Q E D I I R N I A R H L A Q V G D S M D R S I P P G L V N G L A L Q L R N T S R S E E D R N R D L A T A L E Q L L Q A Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T
S T T
T T
S G G G T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . .

Sequence P R D M E K E K T M L V L A L L L A K K V A S H T P S L L R D V F H T T V N F I N Q N L R T Y V R S L A R N G M D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
T T
T T T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	S	M	D	C	E	V	N	N	G	S	S	L	R	D	E	C	I	T	N	L	L	V	F	G	F	L	Q	S	C	S	D	N	S	F	R	R	E	L	D	A	L	G	H	E	L	P	V	L	A	P	Q	W	E	G	Y	D	E	L	Q	T	D	G	N	R	S	S	H	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	S				S						T														T	S		S	S	S								G	G	G						S		S	S		S		S	S					S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	G	R	I	E	A	D	S	E	S	Q	E	D	I	I	R	N	I	A	R	H	L	A	Q	V	G	D	S	M	D	R	S	I	P	P	G	L	V	N	G	L	A	L	Q	L	R	N	T	S	R	S	E	E	D	R	N	R	D	L	A	T	A	L	E	Q	L	L	Q	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S	T	T				S																					T	T			T	T											S	G	G	G																		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Sequence	P	R	D	M	E	K	E	K	T	M	L	V	L	A	L	L	L	A	K	K	V	A	S	H	T	P	S	L	L	R	D	V	F	H	T	T	V	N	F	I	N	Q	N	L	R	T	Y	V	R	S	L	A	R	N	G	M	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S																				T	T															T	T	T										T	S