Job Description P25889 Confidence 94.42% Date Thu Jan 5 11:42:42 GMT 2012 Rank 331 Aligned Residues 153 % Identity 17% Template d5ruba1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.70

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		89	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.												.	.	.	.																								.	.	.
Query SS confidence											.	.												.	.	.	.																								.	.	.
Query Sequence		L	A	A	L	R	R	L	K	E	.	.	D	Y	P	D	K	V	L	I	A	S	I	.	.	.	.	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	.	.	.	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y
Query Conservation											.	.												.	.	.	.																								.	.	.
Alig confidence											.	.												.	.	.	.																				.				.	.	.											.	.	.	.	.	.	.
Template Conservation																																															.																	.	.	.	.	.	.	.
Template Sequence		I	S	A	L	W	K	V	L	G	R	P	E	V	D	G	G	L	V	V	G	T	I	I	K	P	K	L	G	L	R	P	K	P	F	A	E	A	C	H	A	F	W	L	G	G	.	D	F	I	K	N	D	E	P	Q	G	N	Q	P	F	A	P	.	.	.	.	.	.	.	L	R	D	T	I	A	L	V	A	D	A
Template Known Secondary structure										T			S	S	S										S	S	S	S															T	T	T		.	S						T	T		S		B	T	T	B		.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.																	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.								.	.	.	.	.	.	210	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																								.	.	.															.	.	.	.
Query SS confidence																								.	.	.															.	.	.	.
Query Sequence		C	R	A	V	K	R	G	S	T	L	P	M	L	A	K	M	T	P	N	I	G	D	.	.	.	M	C	E	V	A	L	A	A	K	R	G	G	A	D	.	.	.	.	G	I	A	A	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K
Query Conservation																								.	.	.															.	.	.	.
Alig confidence																								.	.	.															.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	R	A	Q	D	E	T	G	E	A	K	L	F	S	A	N	I	T	A	D	D	P	F	E	I	I	A	R	G	E	Y	V	L	E	T	F	G	E	N	A	S	H	V	A	L	L	V	D	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	S											S	S																G	G	G	G	G	G							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.													.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		A	V	K	P	I	A	L	R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	.	.	.	.	.	.	.	.	.	.	.	.	G	I	G	G	I	E	T	W	E	D	A	A	E	F	L	.	L	L	G	A	A	T	L	Q	V	T	T
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence		.	.	.															.	.							.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation		.	.	.															.	.
Template Sequence		.	.	.	V	A	G	A	A	A	I	T	T	A	R	R	R	F	.	.	P	D	N	F	L	H	Y	H	R	A	G	H	G	A	V	T	S	P	Q	S	K	R	G	Y	T	A	F	V	H	C	K	M	A	R	L	Q	G	A	S	G	I	H	T	G	T
Template Known Secondary structure		.	.	.	T	S													.	.	T	T	S							T	T	T					S	T	T			S	S														T		S
Template Predicted Secondary structure		.	.	.															.	.
Template SS confidence
					266	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions