331 d5ruba1 Probab=94.42   E-value=0.35  Score=26.30  Aligned_columns=153  Identities=17%

Q ss_pred             HHHHHHHHH--HCCCCEEEECC----CCCCHHHHHHHHHHHHHCCCCEE---ECCCCCHHCCCCCCCHHHHCCHHHHHHH
Q ss_conf             999998545--44974799404----68999999999988875388801---0478720005776420320698999999
Q batch____        89 LAALRRLKE--DYPDKVLIASI----MGENEQQWEELARLVQEAGADMI---ECNFSCPQMTSHAMGSDVGQSPELVEKY  159 (411)
Q Consensus        89 ~~~~~~~~~--~~~~~~~i~si----~g~~~~~~~~~~~~~~~~~ad~i---eln~s~p~~~~~~~g~~~~~~~~~~~~i  159 (411)
                      ++-++++.-  +..+.|++.++    .|.+++++.+++..+..-| |+|   |+-.+.|...       +......+.+.
T Consensus         6 ieGiR~llG~~ev~~RPLi~tiiKP~~Glsp~~~a~i~ye~a~GG-D~IKDDE~L~~~~~~p-------~eeRv~a~~ea   77 (311)
T d5ruba1           6 ISALWKVLGRPEVDGGLVVGTIIKPKLGLRPKPFAEACHAFWLGG-DFIKNDEPQGNQPFAP-------LRDTIALVADA   77 (311)
T ss_dssp             HHHHHHHHTCCSSSCCCEEEEECSSSSCCCHHHHHHHHHHHTTTC-SEEECCTTCSCBTTBC-------HHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC-CEEECCCCCCCCCCCC-------HHHHHHHHHHH
T ss_conf             899999858854579976886408466799889999999998569-7332278789887797-------89999999999


Q ss_pred             HHHHHHCCCCCCEEEECCCCCC---HHHHHHHHHHCCCC----EEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9999733687720342088220---79999999975998----9999568787532011243322244653331521372
Q batch____       160 CRAVKRGSTLPMLAKMTPNIGD---MCEVALAAKRGGAD----GIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGK  232 (411)
Q Consensus       160 ~~~v~~~~~~pv~vKl~p~~~~---~~~ia~~l~~~Gad----gI~~~nt~~~~~~~~i~~~~~~~~~~~~~~~gg~SG~  232 (411)
                      ++...++++.+++.-.+-+.++   ..+.++.+.+.|+.    ...++|-.                             
T Consensus        78 v~ra~~eTG~~~lYa~NIT~~~~~em~era~~a~~~Ga~~a~~~~lmi~~~-----------------------------  128 (311)
T d5ruba1          78 MRRAQDETGEAKLFSANITADDPFEIIARGEYVLETFGENASHVALLVDGY-----------------------------  128 (311)
T ss_dssp             HHHHHHHHSSCCEEEEECCCSSHHHHHHHHHHHHHHHGGGGGGEEEEEETT-----------------------------
T ss_pred             HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCHH-----------------------------
T ss_conf             999999728955999964769889999999999971331136421310015-----------------------------


Q ss_pred             CHHHHHHHHHHHHHHHCCCCCEEEE------------EECCCCCHHHHHHHH-HCCCCEEEEEH
Q ss_conf             1135679999999985177882799------------988889999999998-47987589941
Q batch____       233 AVKPIALRFIQQMRTHPELRDFPIS------------GIGGIETWEDAAEFL-LLGAATLQVTT  283 (411)
Q Consensus       233 ~l~p~al~~v~~i~~~~~~~~ipIi------------~~GGI~~~~Dv~~~l-~aGA~~Vqv~T  283 (411)
                         +..+..++.+++..  .++||.            -..|..+..=.-++. ++|||.+.+.|
T Consensus       129 ---~~G~~~l~~l~~~~--~~l~ihaH~a~~ga~~~~~~~~g~s~~~l~kl~RLaGaD~i~~~~  187 (311)
T d5ruba1         129 ---VAGAAAITTARRRF--PDNFLHYHRAGHGAVTSPQSKRGYTAFVHCKMARLQGASGIHTGT  187 (311)
T ss_dssp             ---TSCHHHHHHHHHHC--TTSCEEEECTTTHHHHSTTCCSSCCHHHHHHHHHHHTCSEEECCC
T ss_pred             ---HHHHHHHHHHHHHC--CCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEECCC
T ss_conf             ---42389999987305--698387340000454158655741599999999971998985078