Job Description P25889 Confidence 45.15% Date Thu Jan 5 11:42:42 GMT 2012 Rank 488 Aligned Residues 144 % Identity 15% Template c3cyvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism Resolution 2.80 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		L	E	E	N	L	A	A	L	R	R	L	K	E	D	Y	P	D	.	K	V	L	I	A	S	I	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y	C	R	A	V
Query Conservation																			.
Alig confidence																			.										.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	Y	V	M	N	A	V	R	T	I	R	H	E	L	K	G	E	V	P	L	I	G	F	S	G	S	.	.	.	.	P	W	T	L	A	T	Y	M	V	E	G	G	S	S	K	A	F	T	.	.	.	.	.	.	.	.	.	.	.	V	I	K	K	M	M	Y	A	D	P	Q	A	L	H	A	L	L	D	K	L
Template Known Secondary structure		T														T	T	T	S	S									.	.	.	.											S	S			S	S			.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																													.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.												.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	G	S	T	L	P	M	L	A	K	M	T	P	N	I	G	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R	F	I	Q
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T		S							T	T	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186																.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.																							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		244	.	.	.	.	.					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		Q	M	R	T	H	P	.	.	.	.	E	L	R	D	F	P	I	S	G	I	G	G	I	E	T	W	E	D	A	A	E	F	L	L	L	G	A	A	T	L	Q	V
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.													.
Template Conservation																								.
Template Sequence		K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	.	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L
Template Known Secondary structure							S		S			T	T										T	.	T	T	T	T	T						T	T	S		S
Template Predicted Secondary structure																								.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions