488 c3cyvA_ Probab=45.15   E-value=20  Score=15.57  Aligned_columns=144  Identities=15%

Q ss_pred             HHHHHHHHHHHHHHCCC-CEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHCCCCCCCHHHHCCHHHHHHHHHHH
Q ss_conf             99999999985454497-47994046899999999998887538880104787200057764203206989999999999
Q batch____        85 LEENLAALRRLKEDYPD-KVLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAV  163 (411)
Q Consensus        85 ~~~~~~~~~~~~~~~~~-~~~i~si~g~~~~~~~~~~~~~~~~~ad~ieln~s~p~~~~~~~g~~~~~~~~~~~~i~~~v  163 (411)
                      +...++.++.++.++++ .++++.+.|    -|.-....++....-.++           ..-.++..+|+.+.+++..+
T Consensus       119 l~~~~~ai~~~~~~~~~~~~l~g~~~g----P~t~a~~l~~~~~~rg~~-----------~~~~~l~~~Pe~v~~lld~i  183 (352)
T c3cyvA_         119 LGYVMNAVRTIRHELKGEVPLIGFSGS----PWTLATYMVEGGSSKAFT-----------VIKKMMYADPQALHALLDKL  183 (352)
T ss_dssp             THHHHHHHHHHHHHTTTSSCEEEEEEC----HHHHHHHHHHSSCCSSCH-----------HHHHHHTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEECCC----HHHHHHHHHCCCCCCCHH-----------HHHHHHHHHHHHHHHHHHHH
T ss_conf             589999999999971898708986477----799999973466669989-----------99999997299999999999


Q ss_pred             HHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             73368772034208822079999999975998999956878753201124332224465333152137211356799999
Q batch____       164 KRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALRFIQ  243 (411)
Q Consensus       164 ~~~~~~pv~vKl~p~~~~~~~ia~~l~~~GadgI~~~nt~~~~~~~~i~~~~~~~~~~~~~~~gg~SG~~l~p~al~~v~  243 (411)
                      .               +...+..++..++|+|+|.+..+.++.                      +|.+.-....+....
T Consensus       184 ~---------------~~~~~~~~~~~e~Ga~~i~i~d~~a~~----------------------lsp~~f~ef~~P~~k  226 (352)
T c3cyvA_         184 A---------------KSVTLYLNAQIKAGAQAVMIFDTWGGV----------------------LTGRDYQQFSLYYMH  226 (352)
T ss_dssp             H---------------HHHHHHHHHHHHTTCSEEEEECTTGGG----------------------SCHHHHHHHTHHHHH
T ss_pred             H---------------HHHHHHHHHHHHCCCCEEEEECCCCCC----------------------CCHHHHHHHHHHHHH
T ss_conf             9---------------999999999972699589970683235----------------------998999986168999


Q ss_pred             HHHHHC----CCCCEEEEEECCCCCHHHHHHHHHCCCCEEEE
Q ss_conf             999851----77882799988889999999998479875899
Q batch____       244 QMRTHP----ELRDFPISGIGGIETWEDAAEFLLLGAATLQV  281 (411)
Q Consensus       244 ~i~~~~----~~~~ipIi~~GGI~~~~Dv~~~l~aGA~~Vqv  281 (411)
                      ++....    ....+||+...| ......-.+..+|++.+.+
T Consensus       227 ~i~~~i~~~~~~~~~~i~h~cg-~~~~~l~~l~e~g~d~~~~  267 (352)
T c3cyvA_         227 KIVDGLLRENDGRRVPVTLFTK-GGGQWLEAMAETGCDALGL  267 (352)
T ss_dssp             HHHHHSCSEETTEECCEEEECT-TTTTTHHHHHTTSCSEEEC
T ss_pred             HHHHHHHHCCCCCCEEEEEECC-CCHHHHHHHHHCCCCEEEE
T ss_conf             9999998404888717999559-8325678898469979973