Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACY1
Confidence100.00%DateThu Jan 5 11:19:23 GMT 2012
Rank3Aligned Residues167
% Identity22%Templated1zcha1
SCOP infoFMN-dependent nitroreductase-like FMN-dependent nitroreductase-like NADH oxidase/flavin reductase
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10.........20.........30.........40.........50.........60.........70.........
Predicted Secondary structure 

.
























Query SS confidence 

.












































































Query Sequence  MD. ALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVIEGEGRERFSAVLEQGAIAAGSDDKAIDKA
Query Conservation 
 .    
  




 
    
  
 
  

 

  


  
 

    

       
                     
Alig confidence 

.




























































..............

Template Conservation 

  

 
  




 
   

  
 
  

 

  



 
 
    


 
      
    ..............  
Template Sequence  MNEVIKSLTDHRSIRSYTDEPVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDKERKKKISELA. . . . . . . . . . . . . . GG
Template Known Secondary structure 

T





B
S



S

GGG




T..............T
Template Predicted Secondary structure 
























..............

Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.... ..
 
   80.........90........ .100.........110.........120.........130.........140...
Predicted Secondary structure 






................












Query SS confidence 


















. . . . . . . . . . . . . . . .












































Query Sequence  RNAPFRAPLIITVVAKCEE. . . . . . . . . . . . . . . . NHKVPRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVR
Query Conservation        
            ................             
 
     


   




             
Alig confidence 


















................












































Template Conservation 
  
  
        
  
                           








 


 






 

        
 
Template Sequence  QPWIDQAPVFLLFCADFNRAKIALEDLHDFKMEITNGLESVLVGAVDAGIALGTATAAAESLGLGTVPIGAVRGNPQELI
Template Known Secondary structure 
SS





GGGSTT
GGGGSS
Template Predicted Secondary structure 






















Template SS confidence 















































































   67..70.........80.........90.........100.........110.........120.........130.........140......
 
   144.....150.........160.........170.........180..
Predicted Secondary structure 
























Query SS confidence 






































Query Sequence  EAFGCREQDKIVGFLYLGTPQLKASTSINVPDPTPFVTY
Query Conservation    
 

        
 



          
     
  
Alig confidence 






























.






Template Conservation 


 

    

 

 



 
    




.   
   
Template Sequence  ELLELPKYVFPLSGLVIGHPADRSAKKPRLP. QEAVNHQ
Template Known Secondary structure  TT

TT
BS









.S
S
Template Predicted Secondary structure 


















.
Template SS confidence 






































   147..150.........160.........170....... ..180....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions