3 d1zcha1 Probab=100.00  E-value=2.7e-41  Score=242.59  Aligned_columns=167  Identities=22%

Q ss_pred             CC-HHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             95-69999826200065799879899999999998387888898629999749789999999998664112353577887
Q batch____         1 MD-ALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVIEGEGRERFSAVLEQGAIAAGSDDKAIDKA   79 (183)
Q Consensus         1 M~-~~~~i~~RrSvR~f~~~~v~~e~l~~il~aa~~aPs~~n~qp~~~~vv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   79 (183)
                      || ++++|++|||||+|+++|||+|+|++||++|++|||++|+|||+|++|++++.++.+....              ..
T Consensus         1 MN~~ie~i~~RRSiR~F~~~pI~~e~l~~il~aA~~APSs~n~Q~~~~ivV~d~~~~~~l~~~~--------------~~   66 (249)
T d1zcha1           1 MNEVIKSLTDHRSIRSYTDEPVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDKERKKKISELA--------------GG   66 (249)
T ss_dssp             CCHHHHHHHTCCCCCCBCSCCCCHHHHHHHHHHHHHSCCGGGCCCEEEEEECCHHHHHHHHHHT--------------TC
T ss_pred             CCHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHCC--------------CC
T ss_conf             9469999983641007489998989999999999718883687432999974877854345300--------------46


Q ss_pred             HHHHHCCCEEEEEEECCCC----------------CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH
Q ss_conf             6554157489999833565----------------531357888999999999999999977983897443337948999
Q batch____        80 RNAPFRAPLIITVVAKCEE----------------NHKVPRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVR  143 (183)
Q Consensus        80 ~~~~~~a~~~~~~~~~~~~----------------~~~~~~~~~~~~~g~a~~~~~Laa~~~Glgsc~~~~~~~~~~~~~  143 (183)
                      ......++..+..+.+...                +.......+..|+|+++||++|+|+++||||||+|+...+.++++
T Consensus        67 q~~i~~a~~~~~~~~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dagiaaqnl~lAA~slGLGsc~ig~~~~~~~~v~  146 (249)
T d1zcha1          67 QPWIDQAPVFLLFCADFNRAKIALEDLHDFKMEITNGLESVLVGAVDAGIALGTATAAAESLGLGTVPIGAVRGNPQELI  146 (249)
T ss_dssp             CHHHHHSSEEEEEEEECHHHHHHHHHHHCCCCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEGGGGSSHHHHH
T ss_pred             CHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHCCHHHHH
T ss_conf             35667286415530100233555665301210002432567789998999999999999973982898342011789999


Q ss_pred             HHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHCCCC
Q ss_conf             971749887899999840537887888868994450137
Q batch____       144 EAFGCREQDKIVGFLYLGTPQLKASTSINVPDPTPFVTY  182 (183)
Q Consensus       144 ~~l~ip~~~~~~~~i~iGyp~~~~~~~~~~p~~~~~v~~  182 (183)
                      ++||||++..++++|+||||++.+..++|+| .+.+|++
T Consensus       147 elL~LP~~~~pv~gl~iGyP~e~~~~kpRlp-~~~v~~~  184 (249)
T d1zcha1         147 ELLELPKYVFPLSGLVIGHPADRSAKKPRLP-QEAVNHQ  184 (249)
T ss_dssp             HHTTCCTTEEEEEEEEEECBSCCCCCCCCCC-HHHHSCS
T ss_pred             HHHCCCCCEEEEEEEEECCCCCCCCCCCCCC-HHHHHHC
T ss_conf             9836589808999997215378899988999-7795100