Job Description P08244 Confidence 61.11% Date Thu Jan 5 11:01:00 GMT 2012 Rank 222 Aligned Residues 180 % Identity 12% Template d5ruba1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.70

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		55	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure											.											.																					.	.	.	.	.
Query SS confidence											.											.																					.	.	.	.	.
Query Sequence		P	Q	F	V	R	E	L	Q	Q	.	R	G	F	D	I	F	L	D	L	K	.	F	H	D	I	P	N	T	A	A	H	A	V	A	A	A	A	D	L	G	V	.	.	.	.	.	W	M	V	N	V	H	A	S	G	G	A	R	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A	V
Query Conservation											.											.																					.	.	.	.	.
Alig confidence											.											.																					.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.
Template Sequence		A	D	A	M	R	R	A	Q	D	E	T	G	E	A	K	L	F	S	A	N	I	T	A	D	D	P	F	E	I	I	A	R	G	E	Y	V	L	E	T	F	G	E	N	A	S	H	V	A	L	L	V	D	G	Y	V	A	G	A	A	A	I	T	T	A	R	R	R	F	P	D	.	.	.	.	.	.	.	N	F	L
Template Known Secondary structure													S	S											S	S																G	G	G	G	G	G							T	T	T	S													T	T	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.								.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.							.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																																	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.
Query Sequence		T	V	L	T	S	M	E	A	S	D	L	V	D	L	G	M	T	L	S	P	A	D	Y	A	E	R	L	A	A	L	T	Q	K	C	G	L	D	G	V	V	C	S	A	Q	E	A	V	.	.	.	.	.	.	R	F	K	Q	V	F	G	Q	E	F	K	L	V	T	P	G	I	R	P	Q	G	S	E	A	G	D	Q
Query Conservation																																																	.	.	.	.	.	.
Alig confidence																																	.	.	.														.	.	.	.	.	.
Template Conservation																																	.	.	.
Template Sequence		H	Y	H	R	A	G	H	G	A	V	T	S	P	Q	S	K	R	G	Y	T	A	F	V	H	C	K	M	A	R	L	Q	.	.	.	G	A	S	G	I	H	T	G	T	S	S	D	R	A	I	A	Y	M	L	T	Q	D	E	A	Q	G	P	F	Y	R	Q	S	W	G	G	M	K	A	C	T	P	I	I	S	G	G
Template Known Secondary structure						T	T	T					S	T	T			S	S														.	.	.	T		S																			S					S	S						T	T
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		202	.	.	.	.	.	.	.	210	.	.		.	.		.	.	.	.	.	220		.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure													.			.							.										.
Query SS confidence													.			.							.										.
Query Sequence		R	R	I	M	T	P	E	Q	A	L	S	.	A	G	.	V	D	Y	M	V	I	.	G	R	P	V	T	Q	S	V	D	.	P	A	Q	T	L	K	A	I	N	A	S	L	Q	R	S
Query Conservation													.			.							.										.
Alig confidence													.			.							.										.
Template Conservation
Template Sequence		M	N	A	L	R	M	P	G	F	F	E	N	L	G	N	A	N	V	I	L	T	A	G	G	G	A	F	G	H	I	D	G	P	V	A	G	A	R	S	L	R	Q	A	W	Q	A	W
Template Known Secondary structure				T	T	T									S										T	T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions