222 d5ruba1 Probab=61.11   E-value=13  Score=17.63  Aligned_columns=180  Identities=12%

Q ss_pred             HHHHHHHHH-CCCCEEEEEE-ECCCCHHHHHHHHHHHHCCC-----CEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             999999985-4994688652-02431038999999985499-----8899970479889999999999709867279999
Q batch____        55 PQFVRELQQ-RGFDIFLDLK-FHDIPNTAAHAVAAAADLGV-----WMVNVHASGGARMMTAAREALVPFGKDAPLLIAV  127 (245)
Q Consensus        55 ~~~i~~l~k-~~~~i~~D~K-~~Dig~t~~~~~~~~~~~ga-----d~vTvh~~ag~~ti~~~~~~a~~~g~~~~~~l~v  127 (245)
                      ++.++...+ .+...+.=+- ++|-...+...++.+.+.|+     .++.+..+..--+.-..+..-...       +.+
T Consensus        75 ~eav~ra~~eTG~~~lYa~NIT~~~~~em~era~~a~~~Ga~~a~~~~lmi~~~~~G~~~l~~l~~~~~~-------l~i  147 (311)
T d5ruba1          75 ADAMRRAQDETGEAKLFSANITADDPFEIIARGEYVLETFGENASHVALLVDGYVAGAAAITTARRRFPD-------NFL  147 (311)
T ss_dssp             HHHHHHHHHHHSSCCEEEEECCCSSHHHHHHHHHHHHHHHGGGGGGEEEEEETTTSCHHHHHHHHHHCTT-------SCE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHCCC-------CEE
T ss_conf             9999999997289559999647698899999999999713311364213100154238999998730569-------838


Q ss_pred             EECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHH------HHHHHCCCCCEEEECCCCCCCCCCCCC
Q ss_conf             72488984678763226888999999996201079656974814689------988613856469924525656743688
Q batch____       128 TVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAV------RFKQVFGQEFKLVTPGIRPQGSEAGDQ  201 (245)
Q Consensus       128 ~~~ts~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~g~v~~~~~~~------~~r~~~~~~~~~v~pGi~~~~~~~dgg  201 (245)
                      -.-......-..............-++.+++   |.+.+..+...-+      ..-+....-+..--.++++.--...||
T Consensus       148 haH~a~~ga~~~~~~~~g~s~~~l~kl~RLa---GaD~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~lPv~sGG  224 (311)
T d5ruba1         148 HYHRAGHGAVTSPQSKRGYTAFVHCKMARLQ---GASGIHTGTSSDRAIAYMLTQDEAQGPFYRQSWGGMKACTPIISGG  224 (311)
T ss_dssp             EEECTTTHHHHSTTCCSSCCHHHHHHHHHHH---TCSEEECCCCCHHHHHHHHHCSEEECSSCEEECTTCCCCEEEEEEC
T ss_pred             EECCCHHHHHHCCCCCCCHHHHHHHHHHHHC---CCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCC
T ss_conf             7340000454158655741599999999971---9989850787765335328999999998513206788211620788


Q ss_pred             CCCCCHHHHHH-CC-CCEEEE-CCHHHCCCC-HHHHHHHHHHHHHHC
Q ss_conf             67169899985-49-989998-845428989-899999999998732
Q batch____       202 RRIMTPEQALS-AG-VDYMVI-GRPVTQSVD-PAQTLKAINASLQRS  244 (245)
Q Consensus       202 ~~~~t~~~~~~-~G-ad~iVv-Gr~I~~a~d-P~~aa~~~~~~i~~a  244 (245)
                      ++..++.+.++ .| +|++.. |.+|+..+| |+.-++.+|++|+.+
T Consensus       225 ~~~g~vp~~~~~~G~~Dvil~~GGgi~gHP~G~~aGa~A~RqAiea~  271 (311)
T d5ruba1         225 MNALRMPGFFENLGNANVILTAGGGAFGHIDGPVAGARSLRQAWQAW  271 (311)
T ss_dssp             CCTTTHHHHHHHHSCCCCEEEECTTTTCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf             89989899999858933454536066178884257799999999999