Email l.a.kelley@imperial.ac.uk Description P33346 Date Thu Jan 5 11:51:48 GMT 2012 Unique Job ID 5d0884c69ccdca6e

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1uuha_ 77.3 14 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:Link domain 2 d2pf5a1 57.4 10 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:Link domain 3 c3u5gB_ 41.6 19 PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s1-a; PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution 4 d1oyza_ 37.7 16 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:PBS lyase HEAT-like repeat 5 d2nrac1 36.2 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Replication initiation protein 6 d2awna1 36.1 8 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 7 d1nosa_ 35.2 22 Fold:Nitric oxide (NO) synthase oxygenase domain Superfamily:Nitric oxide (NO) synthase oxygenase domain Family:Nitric oxide (NO) synthase oxygenase domain 8 c2xzm4_ 34.1 15 PDB header:ribosome Chain: 4: PDB Molecule:40s ribosomal protein s3a; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 9 c1yzxB_ 30.6 23 PDB header:transferase Chain: B: PDB Molecule:glutathione s-transferase kappa 1; PDBTitle: crystal structure of human kappa class glutathione2 transferase 10 d1pc6a_ 28.7 10 Fold:NinB Superfamily:NinB Family:NinB 11 d1jjcb1 25.9 21 Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:Domains B1 and B5 of PheRS-beta, PheT 12 d1xvla1 22.5 17 Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:TroA-like 13 c2b0tA_ 22.4 18 PDB header:oxidoreductase Chain: A: PDB Molecule:nadp isocitrate dehydrogenase; PDBTitle: structure of monomeric nadp isocitrate dehydrogenase 14 d2cyya1 22.4 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 15 d1te4a_ 21.7 12 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:PBS lyase HEAT-like repeat 16 d1itwa_ 21.2 18 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Monomeric isocitrate dehydrogenase 17 d2cg4a1 21.2 28 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 18 d1vb5a_ 21.0 16 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:IF2B-like 19 d2b59b2 20.2 19 Fold:Prealbumin-like Superfamily:Carboxypeptidase regulatory domain-like Family:Pre-dockerin domain 20 c2dbbA_ 19.8 17 PDB header:transcriptional regulator Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph0061; PDBTitle: crystal structure of ph0061 21 c3somO_ not modelled 19.6 14 PDB header:oxidoreductase Chain: O: PDB Molecule:methylmalonic aciduria and homocystinuria type c protein; PDBTitle: crystal structure of human mmachc 22 d2cfxa1 not modelled 19.5 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 23 d1i1ga1 not modelled 19.0 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 24 c3f6wE_ not modelled 18.8 23 PDB header:dna binding protein Chain: E: PDB Molecule:xre-family like protein; PDBTitle: xre-family like protein from pseudomonas syringae pv. tomato str.2 dc3000 25 c3gkuB_ not modelled 18.2 9 PDB header:rna binding protein Chain: B: PDB Molecule:probable rna-binding protein; PDBTitle: crystal structure of a probable rna-binding protein from clostridium2 symbiosum atcc 14940 26 c1k98A_ not modelled 17.5 24 PDB header:transferase Chain: A: PDB Molecule:methionine synthase; PDBTitle: adomet complex of meth c-terminal fragment 27 d1sbqa_ not modelled 17.3 8 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:Methenyltetrahydrofolate synthetase 28 c1y9qA_ not modelled 17.1 25 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, hth_3 family; PDBTitle: crystal structure of hth_3 family transcriptional regulator2 from vibrio cholerae 29 c1i1gA_ not modelled 16.6 21 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator lrpa; PDBTitle: crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus 30 c2wknE_ not modelled 16.5 16 PDB header:hydrolase Chain: E: PDB Molecule:formamidase; PDBTitle: gamma lactamase from delftia acidovorans 31 d1ixsa_ not modelled 16.3 35 Fold:RuvA C-terminal domain-like Superfamily:DNA helicase RuvA subunit, C-terminal domain Family:DNA helicase RuvA subunit, C-terminal domain 32 c3mfqB_ not modelled 16.0 11 PDB header:metal binding protein Chain: B: PDB Molecule:high-affinity zinc uptake system protein znua; PDBTitle: a glance into the metal binding specificity of troa: where elaborate2 behaviors occur in the active center 33 c2e1cA_ not modelled 15.9 17 PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex 34 c2rliA_ not modelled 15.8 5 PDB header:metal transport Chain: A: PDB Molecule:sco2 protein homolog, mitochondrial; PDBTitle: solution structure of cu(i) human sco2 35 d2hf3a1 not modelled 15.8 21 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Actin/HSP70 36 c2l4aA_ not modelled 15.5 17 PDB header:dna binding protein Chain: A: PDB Molecule:leucine responsive regulatory protein; PDBTitle: nmr structure of the dna-binding domain of e.coli lrp 37 d1z67a1 not modelled 15.2 9 Fold:YidB-like Superfamily:YidB-like Family:YidB-like 38 d1f1sa2 not modelled 15.2 31 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:E-set domains of sugar-utilizing enzymes 39 d1dzka_ not modelled 15.1 22 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 40 c1u3fA_ not modelled 14.8 9 PDB header:ligase Chain: A: PDB Molecule:5,10-methenyltetrahydrofolate synthetase; PDBTitle: structural and functional characterization of a 5,10-2 methenyltetrahydrofolate synthetase from mycoplasma3 pneumoniae (gi: 13508087) 41 c3r0eC_ not modelled 14.0 15 PDB header:sugar binding protein Chain: C: PDB Molecule:lectin; PDBTitle: structure of remusatia vivipara lectin 42 d1yt3a2 not modelled 13.9 27 Fold:SAM domain-like Superfamily:HRDC-like Family:RNase D C-terminal domains 43 d1bj7a_ not modelled 13.8 22 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 44 d1a0ia1 not modelled 13.8 27 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA ligase/mRNA capping enzyme postcatalytic domain 45 c3hpbA_ not modelled 13.2 20 PDB header:protein transport Chain: A: PDB Molecule:snx5 protein; PDBTitle: crystal structure of snx5-px domain in p212121 space group 46 c2rfpA_ not modelled 13.2 11 PDB header:hydrolase Chain: A: PDB Molecule:putative ntp pyrophosphohydrolase; PDBTitle: crystal structure of putative ntp pyrophosphohydrolase2 (yp_001813558.1) from exiguobacterium sibiricum 255-15 at 1.74 a3 resolution 47 c3fiqA_ not modelled 12.9 22 PDB header:transport protein Chain: A: PDB Molecule:odorant-binding protein 1f; PDBTitle: odorant binding protein obp1 48 d2d7va1 not modelled 12.6 19 Fold:OsmC-like Superfamily:OsmC-like Family:Ohr/OsmC resistance proteins 49 c2p6tH_ not modelled 12.6 24 PDB header:transcription Chain: H: PDB Molecule:transcriptional regulator, lrp/asnc family; PDBTitle: crystal structure of transcriptional regulator nmb0573 and l-leucine2 complex from neisseria meningitidis 50 c3odnA_ not modelled 12.2 13 PDB header:membrane protein Chain: A: PDB Molecule:dally-like protein; PDBTitle: the crystal structure of drosophila dally-like protein core domain 51 c3bjxB_ not modelled 12.0 26 PDB header:hydrolase Chain: B: PDB Molecule:halocarboxylic acid dehalogenase dehi; PDBTitle: structure of a group i haloacid dehalogenase from2 pseudomonas putida strain pp3 52 d2phcb1 not modelled 11.6 28 Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:PH0987 C-terminal domain-like 53 c2vbzA_ not modelled 11.5 28 PDB header:dna-binding protein Chain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: feast or famine regulatory protein (rv3291c)from m.2 tuberculosis complexed with l-tryptophan 54 c2r73C_ not modelled 11.5 19 PDB header:transport protein Chain: C: PDB Molecule:trichosurin; PDBTitle: crystal structure of the possum milk whey lipocalin2 trichosurin at ph 8.2 55 d1xkia_ not modelled 11.2 43 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 56 c3ongA_ not modelled 11.2 15 PDB header:ligase Chain: A: PDB Molecule:ubiquitin-activating enzyme e1-like; PDBTitle: crystal structure of uba2ufd-ubc9: insights into e1-e2 interactions in2 sumo pathways 57 d2a6ca1 not modelled 11.1 32 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:NE1354 58 d2f2ea1 not modelled 10.9 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:HxlR-like 59 d1jd0a_ not modelled 10.8 17 Fold:Carbonic anhydrase Superfamily:Carbonic anhydrase Family:Carbonic anhydrase 60 c2kebA_ not modelled 10.8 10 PDB header:dna binding protein Chain: A: PDB Molecule:dna polymerase subunit alpha b; PDBTitle: nmr solution structure of the n-terminal domain of the dna polymerase2 alpha p68 subunit 61 c3op9A_ not modelled 10.8 26 PDB header:transcription regulator Chain: A: PDB Molecule:pli0006 protein; PDBTitle: crystal structure of transcriptional regulator from listeria innocua 62 c2cfxD_ not modelled 10.8 14 PDB header:transcription Chain: D: PDB Molecule:hth-type transcriptional regulator lrpc; PDBTitle: structure of b.subtilis lrpc 63 d1ufma_ not modelled 10.6 0 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:PCI domain (PINT motif) 64 c2e4jA_ not modelled 10.6 21 PDB header:isomerase Chain: A: PDB Molecule:prostaglandin-h2 d-isomerase; PDBTitle: solution structure of mouse lipocalin-type prostaglandin d2 synthase 65 c1pbyA_ not modelled 10.5 17 PDB header:oxidoreductase Chain: A: PDB Molecule:quinohemoprotein amine dehydrogenase 60 kda PDBTitle: structure of the phenylhydrazine adduct of the2 quinohemoprotein amine dehydrogenase from paracoccus3 denitrificans at 1.7 a resolution 66 d1mska_ not modelled 10.5 24 Fold:Methionine synthase activation domain-like Superfamily:Methionine synthase activation domain-like Family:Methionine synthase SAM-binding domain 67 c2e7xA_ not modelled 10.5 24 PDB header:transcription regulator Chain: A: PDB Molecule:150aa long hypothetical transcriptional regulator; PDBTitle: structure of the lrp/asnc like transcriptional regulator from2 sulfolobus tokodaii 7 complexed with its cognate ligand 68 d1e5pa_ not modelled 10.5 21 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 69 c3ooxA_ not modelled 10.5 15 PDB header:oxidoreductase Chain: A: PDB Molecule:putative 2og-fe(ii) oxygenase family protein; PDBTitle: crystal structure of a putative 2og-fe(ii) oxygenase family protein2 (cc_0200) from caulobacter crescentus at 1.44 a resolution 70 d1rp3a1 not modelled 10.5 44 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma3 domain 71 c2h43A_ not modelled 10.5 23 PDB header:blood clotting Chain: A: PDB Molecule:fibrinogen alpha chain; PDBTitle: crystal structure of human fragment d complexed with ala-his-arg-pro-2 amide 72 d1soua_ not modelled 10.4 17 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:Methenyltetrahydrofolate synthetase 73 c6rlxA_ not modelled 10.2 44 PDB header:hormone(muscle relaxant) Chain: A: PDB Molecule:relaxin, a-chain; PDBTitle: x-ray structure of human relaxin at 1.5 angstroms. comparison to2 insulin and implications for receptor binding determinants 74 c6rlxC_ not modelled 10.2 44 PDB header:hormone(muscle relaxant) Chain: C: PDB Molecule:relaxin, a-chain; PDBTitle: x-ray structure of human relaxin at 1.5 angstroms. comparison to2 insulin and implications for receptor binding determinants 75 d2o38a1 not modelled 10.2 32 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:NE1354 76 c2o38A_ not modelled 10.2 32 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: putative xre family transcriptional regulator 77 d1r69a_ not modelled 10.2 27 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 78 c2k9qB_ not modelled 10.2 43 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of hth_xre family transcriptional2 regulator bt_p548217 from bacteroides thetaiotaomicron.3 northeast structural genomics consortium target btr244. 79 c2zp2B_ not modelled 10.0 44 PDB header:transferase inhibitor Chain: B: PDB Molecule:kinase a inhibitor; PDBTitle: c-terminal domain of kipi from bacillus subtilis 80 c2gqqB_ not modelled 10.0 17 PDB header:transcription Chain: B: PDB Molecule:leucine-responsive regulatory protein; PDBTitle: crystal structure of e. coli leucine-responsive regulatory protein2 (lrp) 81 d1sgva1 not modelled 10.0 17 Fold:PUA domain-like Superfamily:PUA domain-like Family:PUA domain 82 c3gk6A_ not modelled 9.9 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:integron cassette protein vch_cass2; PDBTitle: crystal structure from the mobile metagenome of vibrio cholerae.2 integron cassette protein vch_cass2. 83 c2bnoA_ not modelled 9.9 24 PDB header:oxidoreductase Chain: A: PDB Molecule:epoxidase; PDBTitle: the structure of hydroxypropylphosphonic acid epoxidase2 from s. wedmorenis. 84 d1gm6a_ not modelled 9.8 7 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 85 c3qb0C_ not modelled 9.8 19 PDB header:structural protein Chain: C: PDB Molecule:actin-related protein 4; PDBTitle: crystal structure of actin-related protein arp4 from s. cerevisiae2 complexed with atp 86 d1oh1a_ not modelled 9.8 33 Fold:Streptavidin-like Superfamily:beta-Barrel protease inhibitors Family:Staphostatin 87 c1ocuA_ not modelled 9.7 22 PDB header:sorting protein Chain: A: PDB Molecule:sorting nexin; PDBTitle: crystal structure of the yeast px-domain protein grd19p2 (sorting nexin 3) complexed to3 phosphatidylinosytol-3-phospahte. 88 d2o3ia1 not modelled 9.7 14 Fold:CV3147-like Superfamily:CV3147-like Family:CV3147-like 89 d1whza_ not modelled 9.6 19 Fold:dsRBD-like Superfamily:YcfA/nrd intein domain Family:YcfA-like 90 d1hcba_ not modelled 9.5 16 Fold:Carbonic anhydrase Superfamily:Carbonic anhydrase Family:Carbonic anhydrase 91 c1jmxA_ not modelled 9.5 15 PDB header:oxidoreductase Chain: A: PDB Molecule:amine dehydrogenase; PDBTitle: crystal structure of a quinohemoprotein amine dehydrogenase2 from pseudomonas putida 92 c2cseW_ not modelled 9.4 20 PDB header:virus Chain: W: PDB Molecule:major core protein lambda 1; PDBTitle: features of reovirus outer-capsid protein mu1 revealed by2 electron and image reconstruction of the virion at 7.0-a3 resolution 93 c3gknA_ not modelled 9.4 9 PDB header:oxidoreductase Chain: A: PDB Molecule:bacterioferritin comigratory protein; PDBTitle: insights into the alkyl peroxide reduction activity of xanthomonas2 campestris bacterioferritin comigratory protein from the trapped3 intermediate/ligand complex structures 94 d2fswa1 not modelled 9.4 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:HxlR-like 95 d2hy5a1 not modelled 9.3 33 Fold:DsrEFH-like Superfamily:DsrEFH-like Family:DsrEF-like 96 c3clcC_ not modelled 9.3 22 PDB header:transcription regulator/dna Chain: C: PDB Molecule:regulatory protein; PDBTitle: crystal structure of the restriction-modification controller protein2 c.esp1396i tetramer in complex with its natural 35 base-pair operator 97 c2jz8A_ not modelled 9.2 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bh09830; PDBTitle: solution nmr structure of bh09830 from bartonella henselae2 modeled with one zn+2 bound. northeast structural genomics3 consortium target bnr55 98 d1c0fa1 not modelled 9.1 29 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Actin/HSP70 99 c3h32A_ not modelled 9.1 23 PDB header:blood clotting Chain: A: PDB Molecule:fibrinogen alpha chain; PDBTitle: crystal structure of d-dimer from human fibrin complexed with gly-his-2 arg-pro-tyr-amide