Email l.a.kelley@imperial.ac.uk Description P76251 Date Thu Jan 5 12:21:15 GMT 2012 Unique Job ID 5b1902b276be0f25

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3fmxX_ 100.0 78 PDB header:oxidoreductase Chain: X: PDB Molecule:tartrate dehydrogenase/decarboxylase; PDBTitle: crystal structure of tartrate dehydrogenase from pseudomonas2 putida complexed with nadh 2 c2d1cB_ 100.0 35 PDB header:oxidoreductase Chain: B: PDB Molecule:isocitrate dehydrogenase; PDBTitle: crystal structure of tt0538 protein from thermus thermophilus hb8 3 d1cm7a_ 100.0 38 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 4 d1pb1a_ 100.0 29 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 5 d1v53a1 100.0 36 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 6 d1cnza_ 100.0 37 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 7 d1a05a_ 100.0 34 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 8 c3r8wC_ 100.0 36 PDB header:oxidoreductase Chain: C: PDB Molecule:3-isopropylmalate dehydrogenase 2, chloroplastic; PDBTitle: structure of 3-isopropylmalate dehydrogenase isoform 2 from2 arabidopsis thaliana at 2.2 angstrom resolution 9 c2d4vD_ 100.0 29 PDB header:oxidoreductase Chain: D: PDB Molecule:isocitrate dehydrogenase; PDBTitle: crystal structure of nad dependent isocitrate dehydrogenase2 from acidithiobacillus thiooxidans 10 d1g2ua_ 100.0 36 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 11 d1xaca_ 100.0 36 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 12 d1hqsa_ 100.0 31 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 13 d1vlca_ 100.0 36 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 14 c2e0cA_ 100.0 30 PDB header:oxidoreductase Chain: A: PDB Molecule:409aa long hypothetical nadp-dependent isocitrate PDBTitle: crystal structure of isocitrate dehydrogenase from sulfolobus tokodaii2 strain7 at 2.0 a resolution 15 c3u1hA_ 100.0 40 PDB header:oxidoreductase Chain: A: PDB Molecule:3-isopropylmalate dehydrogenase; PDBTitle: crystal structure of ipmdh from the last common ancestor of bacillus 16 d1wpwa_ 100.0 34 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 17 c1x0lB_ 100.0 42 PDB header:oxidoreductase Chain: B: PDB Molecule:homoisocitrate dehydrogenase; PDBTitle: crystal structure of tetrameric homoisocitrate dehydrogenase from an2 extreme thermophile, thermus thermophilus 18 d1w0da_ 100.0 41 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 19 c3blxL_ 100.0 33 PDB header:oxidoreductase Chain: L: PDB Molecule:isocitrate dehydrogenase [nad] subunit 2; PDBTitle: yeast isocitrate dehydrogenase (apo form) 20 c1tyoA_ 100.0 26 PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase; PDBTitle: isocitrate dehydrogenase from the hyperthermophile aeropyrum pernix in2 complex with etheno-nadp 21 c3blxM_ not modelled 100.0 31 PDB header:oxidoreductase Chain: M: PDB Molecule:isocitrate dehydrogenase [nad] subunit 1; PDBTitle: yeast isocitrate dehydrogenase (apo form) 22 c1zorB_ not modelled 100.0 18 PDB header:oxidoreductase Chain: B: PDB Molecule:isocitrate dehydrogenase; PDBTitle: isocitrate dehydrogenase from the hyperthermophile thermotoga maritima 23 c2uxqB_ not modelled 100.0 20 PDB header:oxidoreductase Chain: B: PDB Molecule:isocitrate dehydrogenase native; PDBTitle: isocitrate dehydrogenase from the psychrophilic bacterium2 desulfotalea psychrophila: biochemical properties and3 crystal structure analysis 24 d1lwda_ not modelled 100.0 18 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 25 c3us8A_ not modelled 100.0 16 PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase [nadp]; PDBTitle: crystal structure of an isocitrate dehydrogenase from sinorhizobium2 meliloti 1021 26 d1t0la_ not modelled 100.0 17 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 27 c2qfyE_ not modelled 100.0 19 PDB header:oxidoreductase Chain: E: PDB Molecule:isocitrate dehydrogenase [nadp]; PDBTitle: crystal structure of saccharomyces cerevesiae mitochondrial nadp(+)-2 dependent isocitrate dehydrogenase in complex with a-ketoglutarate 28 c2iv0A_ not modelled 100.0 32 PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase; PDBTitle: thermal stability of isocitrate dehydrogenase from2 archaeoglobus fulgidus studied by crystal structure3 analysis and engineering of chimers 29 c2hi1A_ not modelled 99.0 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 2; PDBTitle: the structure of a putative 4-hydroxythreonine-4-phosphate2 dehydrogenase from salmonella typhimurium. 30 d1ptma_ not modelled 99.0 16 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PdxA-like 31 d1r8ka_ not modelled 98.8 17 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PdxA-like 32 c1yxoB_ not modelled 98.5 16 PDB header:oxidoreductase Chain: B: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 1; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic protein pdxa2 pa0593 33 d1itwa_ not modelled 98.1 18 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Monomeric isocitrate dehydrogenase 34 c2b0tA_ not modelled 98.0 14 PDB header:oxidoreductase Chain: A: PDB Molecule:nadp isocitrate dehydrogenase; PDBTitle: structure of monomeric nadp isocitrate dehydrogenase 35 c2q62A_ not modelled 77.0 10 PDB header:flavoprotein Chain: A: PDB Molecule:arsh; PDBTitle: crystal structure of arsh from sinorhizobium meliloti 36 d2fpoa1 not modelled 66.7 10 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:YhhF-like 37 c1p84E_ not modelled 57.1 32 PDB header:oxidoreductase Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur PDBTitle: hdbt inhibited yeast cytochrome bc1 complex 38 d2onsa1 not modelled 53.1 13 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 39 c3cfxA_ not modelled 53.0 12 PDB header:transport protein Chain: A: PDB Molecule:upf0100 protein ma_0280; PDBTitle: crystal structure of m. acetivorans periplasmic binding protein2 moda/wtpa with bound tungstate 40 c2fyuE_ not modelled 51.8 32 PDB header:oxidoreductase Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit, PDBTitle: crystal structure of bovine heart mitochondrial bc1 with jg1442 inhibitor 41 c3s40C_ not modelled 49.1 11 PDB header:transferase Chain: C: PDB Molecule:diacylglycerol kinase; PDBTitle: the crystal structure of a diacylglycerol kinases from bacillus2 anthracis str. sterne 42 c3cfzA_ not modelled 48.2 9 PDB header:transport protein Chain: A: PDB Molecule:upf0100 protein mj1186; PDBTitle: crystal structure of m. jannaschii periplasmic binding2 protein moda/wtpa with bound tungstate 43 d3thia_ not modelled 44.0 18 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 44 d1riea_ not modelled 41.0 32 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 45 c3k6wA_ not modelled 40.4 12 PDB header:transport protein Chain: A: PDB Molecule:solute-binding protein ma_0280; PDBTitle: apo and ligand bound structures of moda from the archaeon2 methanosarcina acetivorans 46 c2fynO_ not modelled 39.6 29 PDB header:oxidoreductase Chain: O: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur PDBTitle: crystal structure analysis of the double mutant rhodobacter2 sphaeroides bc1 complex 47 c1orhA_ not modelled 37.3 10 PDB header:transferase Chain: A: PDB Molecule:protein arginine n-methyltransferase 1; PDBTitle: structure of the predominant protein arginine methyltransferase prmt1 48 d1oria_ not modelled 36.4 10 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Arginine methyltransferase 49 d3cx5e1 not modelled 32.1 32 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 50 c2e76D_ not modelled 28.5 38 PDB header:photosynthesis Chain: D: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus 51 c1twyG_ not modelled 26.8 16 PDB header:structural genomics, unknown function Chain: G: PDB Molecule:abc transporter, periplasmic substrate-binding protein; PDBTitle: crystal structure of an abc-type phosphate transport receptor from2 vibrio cholerae 52 d1twya_ not modelled 26.8 16 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 53 c3fzgA_ not modelled 25.7 6 PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of the 16s rrna methylase arma 54 c3grzA_ not modelled 24.6 23 PDB header:transferase Chain: A: PDB Molecule:ribosomal protein l11 methyltransferase; PDBTitle: crystal structure of ribosomal protein l11 methylase from2 lactobacillus delbrueckii subsp. bulgaricus 55 c2nvgA_ not modelled 24.1 26 PDB header:oxidoreductase Chain: A: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit; PDBTitle: soluble domain of rieske iron sulfur protein. 56 c3qd7X_ not modelled 23.5 5 PDB header:hydrolase Chain: X: PDB Molecule:uncharacterized protein ydal; PDBTitle: crystal structure of ydal, a stand-alone small muts-related protein2 from escherichia coli 57 d1ydga_ not modelled 23.1 15 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:WrbA-like 58 d2fyta1 not modelled 22.9 12 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Arginine methyltransferase 59 c2huzB_ not modelled 17.2 13 PDB header:structural genomics, transferase Chain: B: PDB Molecule:glucosamine 6-phosphate n-acetyltransferase; PDBTitle: crystal structure of gnpnat1 60 d2fcaa1 not modelled 16.2 10 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:TrmB-like 61 c3lwzC_ not modelled 16.1 24 PDB header:lyase Chain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.65 angstrom resolution crystal structure of type ii 3-2 dehydroquinate dehydratase (aroq) from yersinia pestis 62 d2z3va1 not modelled 16.0 12 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:Universal stress protein-like 63 d1t0ia_ not modelled 15.8 19 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:NADPH-dependent FMN reductase 64 d1yzha1 not modelled 15.5 6 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:TrmB-like 65 d1g6q1_ not modelled 15.3 10 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Arginine methyltransferase 66 c3ksmA_ not modelled 15.2 13 PDB header:transport protein Chain: A: PDB Molecule:abc-type sugar transport system, periplasmic component; PDBTitle: crystal structure of abc-type sugar transport system, periplasmic2 component from hahella chejuensis 67 c2pebB_ not modelled 15.1 22 PDB header:oxidoreductase Chain: B: PDB Molecule:putative dioxygenase; PDBTitle: crystal structure of a putative dioxygenase (npun_f1925) from nostoc2 punctiforme pcc 73102 at 1.46 a resolution 68 c2qhxB_ not modelled 15.0 18 PDB header:oxidoreductase Chain: B: PDB Molecule:pteridine reductase 1; PDBTitle: structure of pteridine reductase from leishmania major2 complexed with a ligand 69 d1n1jb_ not modelled 14.9 11 Fold:Histone-fold Superfamily:Histone-fold Family:TBP-associated factors, TAFs 70 d1tzyb_ not modelled 14.8 38 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 71 c3fg9B_ not modelled 14.6 18 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein of universal stress protein uspa family; PDBTitle: the crystal structure of an universal stress protein uspa2 family protein from lactobacillus plantarum wcfs1 72 d1ofda1 not modelled 14.6 19 Fold:Single-stranded right-handed beta-helix Superfamily:Alpha subunit of glutamate synthase, C-terminal domain Family:Alpha subunit of glutamate synthase, C-terminal domain 73 d1hioa_ not modelled 13.4 11 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 74 d1cyxa_ not modelled 13.3 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Periplasmic domain of cytochrome c oxidase subunit II 75 c1cyxA_ not modelled 13.3 21 PDB header:electron transport Chain: A: PDB Molecule:cyoa; PDBTitle: quinol oxidase (periplasmic fragment of subunit ii with2 engineered cu-a binding site)(cyoa) 76 d1r5ja_ not modelled 13.2 17 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Phosphotransacetylase 77 c2uvgA_ not modelled 13.2 14 PDB header:sugar-binding protein Chain: A: PDB Molecule:abc type periplasmic sugar-binding protein; PDBTitle: structure of a periplasmic oligogalacturonide binding2 protein from yersinia enterocolitica 78 c1f66C_ not modelled 12.6 11 PDB header:structural protein/dna Chain: C: PDB Molecule:histone h2a.z; PDBTitle: 2.6 a crystal structure of a nucleosome core particle2 containing the variant histone h2a.z 79 d1f66c_ not modelled 12.6 11 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 80 c2hxrA_ not modelled 11.9 15 PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional regulator cynr; PDBTitle: structure of the ligand binding domain of e. coli cynr, a2 transcriptional regulator controlling cyanate metabolism 81 c3er6D_ not modelled 11.8 17 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:putative transcriptional regulator protein; PDBTitle: crystal structure of a putative transcriptional regulator2 protein from vibrio parahaemolyticus 82 d1id3d_ not modelled 11.8 29 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 83 d1n1ja_ not modelled 11.6 16 Fold:Histone-fold Superfamily:Histone-fold Family:TBP-associated factors, TAFs 84 c3b3jA_ not modelled 11.6 14 PDB header:transferase Chain: A: PDB Molecule:histone-arginine methyltransferase carm1; PDBTitle: the 2.55 a crystal structure of the apo catalytic domain of2 coactivator-associated arginine methyl transferase i(carm1:28-507,3 residues 28-146 and 479-507 not ordered) 85 d1i27a_ not modelled 11.5 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal domain of the rap74 subunit of TFIIF 86 d2jssa1 not modelled 11.5 14 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 87 c2f8nK_ not modelled 11.4 11 PDB header:structural protein/dna Chain: K: PDB Molecule:histone h2a type 1; PDBTitle: 2.9 angstrom x-ray structure of hybrid macroh2a nucleosomes 88 c3c6kC_ not modelled 11.2 10 PDB header:transferase Chain: C: PDB Molecule:spermine synthase; PDBTitle: crystal structure of human spermine synthase in complex2 with spermidine and 5-methylthioadenosine 89 c2qv7A_ not modelled 11.0 13 PDB header:transferase Chain: A: PDB Molecule:diacylglycerol kinase dgkb; PDBTitle: crystal structure of diacylglycerol kinase dgkb in complex with adp2 and mg 90 d1fftb1 not modelled 10.8 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Periplasmic domain of cytochrome c oxidase subunit II 91 d1e7wa_ not modelled 10.7 18 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 92 d1i7na1 not modelled 10.6 25 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:Synapsin domain 93 d1jq4a_ not modelled 10.4 23 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 94 d1p3mh_ not modelled 10.4 38 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 95 c2zqeA_ not modelled 10.3 11 PDB header:dna binding protein Chain: A: PDB Molecule:muts2 protein; PDBTitle: crystal structure of the smr domain of thermus thermophilus muts2 96 d1q77a_ not modelled 10.3 13 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:Universal stress protein-like 97 d1ku5a_ not modelled 10.1 33 Fold:Histone-fold Superfamily:Histone-fold Family:Archaeal histone 98 d1hiob_ not modelled 10.0 38 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 99 d1tzya_ not modelled 10.0 11 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones