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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2uxqB_

Fold library idPDB HeaderMoleculeTitle
c2uxqB_PDB header: oxidoreductaseChain: B: PDB Molecule: isocitrate dehydrogenase native;PDBTitle: isocitrate dehydrogenase from the psychrophilic bacterium2 desulfotalea psychrophila: biochemical properties and3 crystal structure analysis


Added to library: Tue Mar 16 11:58:55 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKIQMKTPLVELDGDEMTRVLWPLIKDKLLLPFIDLQTEYYDLGIEERDRTNDQITIDAAEAIKKYGVGV
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Known secondary structure (DSSP)

B

SS


TTTTB



STTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KNATITPNQDRVEEYGLKEQWKSPNATVRAMLDGTVFRKPIMVKNIKPSVRSWQKPIVVGRHAYGDFYKN
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T
SS








TTB

SSTT

S


S
GGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence AEIFAEAGGKLEIVVTDKNGKETRQTIMEVDEPAIVQGIHNTVASIGHFARACFEYSLDQKIDCWFATKD
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Known secondary structure (DSSP) TT

TT

SS




T


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence TISKQYDQRFKIIFEEIFAQEYKEKFAAAGIEYFYTLIDDVVARMMKTEGGMLWACKNYDGDVMSDMVAS
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Known secondary structure (DSSP) TT
TTTT

TT



S
 .........290.........300.........310.........320.........330.........340.........350
Sequence AFGSLAMMSSVLVSPYGYFEYEAAHGTVQRHYYQHLKGERTSTNPVALIYAWTGALRKRGELDGTPDLCA
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Known secondary structure (DSSP) T
TTS
TTS


S


TT






T
 .........360.........370.........380.........390.........400.
Sequence FCDSLEAITIECIESGYMTGDLARICEPAAIKVLDSIEFIDELGKRLQQLN
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Known secondary structure (DSSP) TT
TTBSS

S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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