Job Description P64426 Confidence 98.35% Date Thu Jan 5 12:08:13 GMT 2012 Rank 148 Aligned Residues 254 % Identity 17% Template c3civA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endo-beta-1,4-mannanase; PDBTitle: crystal structure of the endo-beta-1,4-mannanase from2 alicyclobacillus acidocaldarius Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	M	I	D	K	L	D	H	L	Q	R	L	G	I	N	T	V	F	F	Q	V	K	P	D	G	T	A	L	W	P	S	K	I	L	P	W	S	D	L	M	T	G	K	I	G	E	N	P	G	Y	D	P	L	Q	F	M	L	D	E	A	H	K	R	G	M	K	V	H	A	W	F	N	P	Y	R	V	S	V	N
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Sequence		D	E	A	R	A	S	M	R	A	L	A	E	Q	P	F	N	W	V	T	L	A	F	A	G	L	M	E	H	P	G	D	P	A	I	A	Y	G	P	P	V	T	.	.	.	.	.	.	.	V	S	D	D	E	I	A	S	M	A	E	L	A	H	A	L	G	L	K	V	C	L	K	P	.	.	.	.	.	.	.	.
Template Known Secondary structure														S	S		S											S	S	T	T					B		S	T	T	T	B	.	.	.	.	.	.	.																T	T								.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70								.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																														.	.	.																														.	.	.
Query SS confidence																														.	.	.																														.	.	.
Query Sequence		T	K	P	G	T	I	R	E	L	N	S	T	L	S	Q	Q	P	A	S	V	Y	V	Q	H	R	D	W	I	.	.	.	R	T	S	G	D	R	F	V	L	D	P	G	I	P	E	V	Q	D	W	I	T	S	I	V	A	E	V	V	S	.	.	.	R	Y	P	V	D	G	V	Q	F	D	D	Y	F	Y	T	E	S
Query Conservation																														.	.	.																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.																														.	.	.															.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	N	C	R	D	G	T	W	R	G	E	I	R	F	E	K	E	H	G	P	D	L	E	S	W	E	A	W	F	G	S	Y	S	D	M	M	A	H	Y	A	H	V	A	K	R	T	G	C	E	M	F	C	V	G	C	E	M	T	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T				G	G	G				S	B	S			T	T	S	S	B																						T	T		S							S		T	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.	.
Template SS confidence
																				95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	S	R	L	N	D	N	E	T	Y	R	K	Y	G	G	A	F	A	S	K	A	D	W	R	R	N	N	T	Q	Q	L	I	A	K	V	S	H	T	I	K	S	I	K	P	G	V	E	F	G	V	S	P	A	G	V	W	R	N	R	S	H	D	P	L	G	S	D	T	R	G	A	A	A	Y	D	E	S	Y	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	E	P	H	E	A	M	W	R	E	T	I	A	R	V	R	T	E	Y	D	G	L	V	T	Y	N	C	N	H	G	R	E	E	H	V	R	F	W	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T																		S								T	T		T	T	T		S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																										154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.								.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.
Query Sequence		D	T	R	R	W	V	E	Q	G	L	L	D	Y	I	A	P	Q	I	Y	W	P	F	S	R	S	A	A	R	Y	D	V	L	A	K	W	W	A	D	V	V	K	P	T	R	T	R	L	Y	I	G	I	A	F	Y	K	V	G	E	P	S	K	I	.	.	.	.	.	.	.	E	P	D	W	M	I	N	G	G	V	P
Query Conservation																																																																.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.															.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	V	D	L	I	S	S	S	A	Y	Y	P	I	D	R	.	.	.	.	W	R	D	R	V	P	V	L	R	E	V	A	E	A	H	E	K	P	L	F	F	M	E	V	G	C	P	S	R	S	G	S	G	A	C	P	W	D	Y	R	H	P	G	A	V	C	L	D	E	Q	A	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S	S										G	G	G	.	.	.	.																T												S	B	T	T	G	G	G	S	T	T		T	T					B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
												195	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	K	K	Q	L	D	L	N	D	A	V	P	E	I	S	G	T	I	L	F	R	E	D	Y	L	N	K	P	Q	T	Q	Q	A	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	E	A	M	F	A	A	M	P	D	E	P	W	F	K	G	Y	M	L	W	E	W	P	W	K	L	Y	P	R	E	A	A	S	E	D
Template Known Secondary structure										S				T	T											S	S				G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions