Email l.a.kelley@imperial.ac.uk Description P0ADQ5 Date Thu Jan 5 11:21:33 GMT 2012 Unique Job ID 534b0a197c67fba8

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2k5jB_ 100.0 41 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein yiif; PDBTitle: solution structure of protein yiif from shigella flexneri2 serotype 5b (strain 8401) . northeast structural genomics3 consortium target sft1 2 c1q5vB_ 97.9 20 PDB header:transcription Chain: B: PDB Molecule:nickel responsive regulator; PDBTitle: apo-nikr 3 c2bj3D_ 97.9 12 PDB header:transcription Chain: D: PDB Molecule:nickel responsive regulator; PDBTitle: nikr-apo 4 d2bj7a1 97.9 9 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 5 c2ca9B_ 97.7 17 PDB header:transcriptional regulation Chain: B: PDB Molecule:putative nickel-responsive regulator; PDBTitle: apo-nikr from helicobacter pylori in closed trans-2 conformation 6 d2hzaa1 97.1 23 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 7 d2hzab1 96.9 23 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 8 c2rbfB_ 94.9 18 PDB header:oxidoreductase/dna Chain: B: PDB Molecule:bifunctional protein puta; PDBTitle: structure of the ribbon-helix-helix domain of escherichia coli puta2 (puta52) complexed with operator dna (o2) 9 d2cpga_ 93.9 30 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 10 c2an7A_ 91.6 19 PDB header:dna binding protein Chain: A: PDB Molecule:protein pard; PDBTitle: solution structure of the bacterial antidote pard 11 c2k9iB_ 89.0 18 PDB header:dna binding protein Chain: B: PDB Molecule:plasmid prn1, complete sequence; PDBTitle: nmr structure of plasmid copy control protein orf56 from2 sulfolobus islandicus 12 c3h87D_ 88.8 19 PDB header:toxin/antitoxin Chain: D: PDB Molecule:putative uncharacterized protein; PDBTitle: rv0301 rv0300 toxin antitoxin complex from mycobacterium tuberculosis 13 d2ay0a1 79.1 18 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:PutA pre-N-terminal region-like 14 d2bsqe1 52.1 17 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Trafficking protein A-like 15 c2k29A_ 49.6 22 PDB header:transcription Chain: A: PDB Molecule:antitoxin relb; PDBTitle: structure of the dbd domain of e. coli antitoxin relb 16 d1p94a_ 43.2 18 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 17 c2q2kA_ 25.3 26 PDB header:dna binding protein/dna Chain: A: PDB Molecule:hypothetical protein; PDBTitle: structure of nucleic-acid binding protein 18 d1fcdc1 22.4 19 Fold:Cytochrome c Superfamily:Cytochrome c Family:Two-domain cytochrome c 19 c1yxeA_ 21.2 23 PDB header:immune system Chain: A: PDB Molecule:apical membrane antigen 1; PDBTitle: structure and inter-domain interactions of domain ii from the blood2 stage malarial protein, apical membrane antigen 1 20 c2kelB_ 20.4 17 PDB header:transcription repressor Chain: B: PDB Molecule:uncharacterized protein 56b; PDBTitle: structure of the transcription regulator svtr from the2 hyperthermophilic archaeal virus sirv1 21 c3kxeD_ not modelled 20.3 13 PDB header:protein binding Chain: D: PDB Molecule:antitoxin protein pard-1; PDBTitle: a conserved mode of protein recognition and binding in a2 pard-pare toxin-antitoxin complex 22 d1mnta_ not modelled 18.6 15 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 23 c2dbiA_ not modelled 18.5 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ybiu; PDBTitle: crystal structure of a hypothetical protein jw0805 from2 escherichia coli 24 c3mayE_ not modelled 16.1 7 PDB header:heme-binding protein Chain: E: PDB Molecule:possible exported protein; PDBTitle: crystal structure of a secreted mycobacterium tuberculosis heme-2 binding protein 25 c2qhoF_ not modelled 15.2 30 PDB header:protein binding/ligase Chain: F: PDB Molecule:e3 ubiquitin-protein ligase edd1; PDBTitle: crystal structure of the uba domain from edd ubiquitin2 ligase in complex with ubiquitin 26 c3o39A_ not modelled 13.7 16 PDB header:chaperone Chain: A: PDB Molecule:periplasmic protein related to spheroblast formation; PDBTitle: crystal structure of spy 27 d1i27a_ not modelled 13.0 31 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal domain of the rap74 subunit of TFIIF 28 c1ny9A_ not modelled 11.0 22 PDB header:transcription Chain: A: PDB Molecule:transcriptional activator tipa-s; PDBTitle: antibiotic binding domain of a tipa-class multidrug2 resistance transcriptional regulator 29 d1ny9a_ not modelled 11.0 22 Fold:Antibiotic binding domain of TipA-like multidrug resistance regulators Superfamily:Antibiotic binding domain of TipA-like multidrug resistance regulators Family:Antibiotic binding domain of TipA-like multidrug resistance regulators 30 d1l5aa2 not modelled 10.2 20 Fold:CoA-dependent acyltransferases Superfamily:CoA-dependent acyltransferases Family:NRPS condensation domain (amide synthase) 31 c3qzcA_ not modelled 9.8 12 PDB header:signaling protein Chain: A: PDB Molecule:periplasmic protein cpxp; PDBTitle: structure of the periplasmic stress response protein cpxp 32 c2rqpA_ not modelled 9.7 15 PDB header:gene regulation Chain: A: PDB Molecule:heterochromatin protein 1-binding protein 3; PDBTitle: the solution structure of heterochromatin protein 1-binding2 protein 74 histone h1 like domain 33 d1b3ta_ not modelled 9.3 14 Fold:Ferredoxin-like Superfamily:Viral DNA-binding domain Family:Viral DNA-binding domain 34 d1vhib_ not modelled 9.2 14 Fold:Ferredoxin-like Superfamily:Viral DNA-binding domain Family:Viral DNA-binding domain 35 c3oeoD_ not modelled 8.7 13 PDB header:signaling protein Chain: D: PDB Molecule:spheroplast protein y; PDBTitle: the crystal structure e. coli spy 36 d1fcdc2 not modelled 8.6 4 Fold:Cytochrome c Superfamily:Cytochrome c Family:Two-domain cytochrome c 37 c2hwyB_ not modelled 8.3 14 PDB header:rna binding protein Chain: B: PDB Molecule:protein smg5; PDBTitle: structure of pin domain of human smg5. 38 c1kcfB_ not modelled 8.3 22 PDB header:hydrolase Chain: B: PDB Molecule:hypothetical 30.2 kd protein c25g10.02 in PDBTitle: crystal structure of the yeast mitochondrial holliday2 junction resolvase, ydc2 39 c2fu2A_ not modelled 8.0 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein spy2152; PDBTitle: crystal structure of protein spy2152 from streptococcus pyogenes 40 c1sfeA_ not modelled 7.9 12 PDB header:dna-binding protein Chain: A: PDB Molecule:ada o6-methylguanine-dna methyltransferase; PDBTitle: ada o6-methylguanine-dna methyltransferase from escherichia coli 41 c1x93B_ not modelled 7.7 21 PDB header:transcription Chain: B: PDB Molecule:hypothetical protein hp0222; PDBTitle: nmr structure of helicobacter pylori hp0222 42 d1x93a1 not modelled 7.7 21 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 43 d2phcb1 not modelled 7.0 6 Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:PH0987 C-terminal domain-like 44 d2outa2 not modelled 7.0 21 Fold:GINS/PriA/YqbF domain Superfamily:PriA/YqbF domain Family:YqbF N-terminal domain-like 45 c3g5oC_ not modelled 6.8 23 PDB header:toxin/antitoxin Chain: C: PDB Molecule:uncharacterized protein rv2866; PDBTitle: the crystal structure of the toxin-antitoxin complex relbe2 (rv2865-2 2866) from mycobacterium tuberculosis 46 c3epvB_ not modelled 6.7 9 PDB header:metal binding protein Chain: B: PDB Molecule:nickel and cobalt resistance protein cnrr; PDBTitle: x-ray structure of the metal-sensor cnrx in both the apo- and copper-2 bound forms 47 d1uxca_ not modelled 6.3 24 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 48 c2e4jA_ not modelled 6.2 12 PDB header:isomerase Chain: A: PDB Molecule:prostaglandin-h2 d-isomerase; PDBTitle: solution structure of mouse lipocalin-type prostaglandin d2 synthase 49 d1yqaa1 not modelled 6.1 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Linker histone H1/H5 50 c3by0B_ not modelled 6.0 12 PDB header:ligand binding protein Chain: B: PDB Molecule:neutrophil gelatinase-associated lipocalin; PDBTitle: crystal structure of siderocalin (ngal, lipocalin 2) w79a-r81a2 complexed with ferric enterobactin 51 d1znda1 not modelled 6.0 24 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 52 c2o3fC_ not modelled 6.0 24 PDB header:transcription Chain: C: PDB Molecule:putative hth-type transcriptional regulator ybbh; PDBTitle: structural genomics, the crystal structure of the n-2 terminal domain of the putative transcriptional regulator3 ybbh from bacillus subtilis subsp. subtilis str. 168. 53 d2o3fa1 not modelled 6.0 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:RpiR-like 54 d2csga1 not modelled 5.8 13 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:YbiU-like 55 c3itfA_ not modelled 5.8 19 PDB header:signaling protein Chain: A: PDB Molecule:periplasmic adaptor protein cpxp; PDBTitle: structural basis for the inhibitory function of the cpxp adaptor2 protein 56 c2jobA_ not modelled 5.6 11 PDB header:lipid binding protein Chain: A: PDB Molecule:antilipopolysaccharide factor; PDBTitle: solution structure of an antilipopolysaccharide factor from2 shrimp and its possible lipid a binding site 57 c2zqeA_ not modelled 5.6 33 PDB header:dna binding protein Chain: A: PDB Molecule:muts2 protein; PDBTitle: crystal structure of the smr domain of thermus thermophilus muts2 58 d1uhma_ not modelled 5.5 29 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Linker histone H1/H5 59 c2zp2B_ not modelled 5.4 12 PDB header:transferase inhibitor Chain: B: PDB Molecule:kinase a inhibitor; PDBTitle: c-terminal domain of kipi from bacillus subtilis 60 d2je6b2 not modelled 5.3 13 Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like 61 c2lcvA_ not modelled 5.3 24 PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional repressor cytr; PDBTitle: structure of the cytidine repressor dna-binding domain; an alternate2 calculation