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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c1yxeA_ | PDB header: immune system | Chain: A: PDB Molecule: apical membrane antigen 1; | PDBTitle: structure and inter-domain interactions of domain ii from2 the blood stage malarial protein, apical membrane antigen 1 |
Added to library: Tue Mar 16 12:42:31 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | M | R | G | S | H | H | H | H | H | H | G | S | N | A | K | F | G | L | W | V | D | G | N | C | E | D | I | P | H | V | N | E | F | P | A | I | D | L | F | E | C | N | K | L | V | F | E | L | S | A | S | D | Q | P | K | Q | Y | E | Q | H | L | T | D | Y | E | K | I | K | E | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | T | T | T | S | S | S | T | T | S | S | G | G | G | S | S | S | S | G | G | G | T | G | G | G | G | G | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | F | K | N | K | N | A | S | M | I | K | S | A | F | L | P | T | G | A | F | K | A | D | R | Y | K | S | H | G | K | G | Y | N | W | G | N | Y | N | T | E | T | Q | K | C | E | I | F | N | V | K | P | T | C | L | I | N | N | S | S | Y | I | A | T | T | A | L | S | H | P | I | E |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | S | S | S | ![]() | ![]() | ![]() | ![]() | G | G | G | S | T | T | G | G | G | G | G | G | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | S | S | S | S | B | S | S |
Download: | PDB structure | FASTA sequence |
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