Email l.a.kelley@imperial.ac.uk Description P77214 Date Thu Jan 5 12:26:26 GMT 2012 Unique Job ID 4f62f0a24ea79a2f

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1zeqX_ 100.0 99 PDB header:metal binding protein Chain: X: PDB Molecule:cation efflux system protein cusf; PDBTitle: 1.5 a structure of apo-cusf residues 6-88 from escherichia2 coli 2 c2l55A_ 99.9 27 PDB header:metal binding protein Chain: A: PDB Molecule:silb,silver efflux protein, mfp component of the three PDBTitle: solution structure of the c-terminal domain of silb from cupriavidus2 metallidurans 3 c3camB_ 95.2 20 PDB header:gene regulation Chain: B: PDB Molecule:cold-shock domain family protein; PDBTitle: crystal structure of the cold shock domain protein from neisseria2 meningitidis 4 c2k5nA_ 94.2 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative cold-shock protein; PDBTitle: solution nmr structure of the n-terminal domain of protein2 eca1580 from erwinia carotovora, northeast structural3 genomics consortium target ewr156a 5 c3trzE_ 91.0 15 PDB header:rna binding protein/rna Chain: E: PDB Molecule:protein lin-28 homolog a; PDBTitle: mouse lin28a in complex with let-7d microrna pre-element 6 d2es2a1 90.9 16 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 7 c2kcmA_ 87.9 18 PDB header:nucleic acid binding protein Chain: A: PDB Molecule:cold shock domain family protein; PDBTitle: solution nmr structure of the n-terminal ob-domain of so_1732 from2 shewanella oneidensis. northeast structural genomics consortium3 target sor210a. 8 d1mjca_ 86.2 17 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 9 d1c9oa_ 84.2 21 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 10 c3aqqD_ 82.8 13 PDB header:dna binding protein Chain: D: PDB Molecule:calcium-regulated heat stable protein 1; PDBTitle: crystal structure of human crhsp-24 11 c2ytxA_ 81.6 18 PDB header:rna binding protein Chain: A: PDB Molecule:cold shock domain-containing protein e1; PDBTitle: solution structure of the second cold-shock domain of the human2 kiaa0885 protein (unr protein) 12 d1g6pa_ 76.4 21 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 13 d1h95a_ 76.2 15 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 14 c3tdqB_ 75.0 21 PDB header:cell adhesion Chain: B: PDB Molecule:pily2 protein; PDBTitle: crystal structure of a fimbrial biogenesis protein pily22 (pily2_pa4555) from pseudomonas aeruginosa pao1 at 2.10 a resolution 15 c2ytvA_ 72.6 15 PDB header:rna binding protein Chain: A: PDB Molecule:cold shock domain-containing protein e1; PDBTitle: solution structure of the fifth cold-shock domain of the human2 kiaa0885 protein (unr protein) 16 c1x65A_ 71.6 14 PDB header:rna binding protein Chain: A: PDB Molecule:unr protein; PDBTitle: solution structure of the third cold-shock domain of the human2 kiaa0885 protein (unr protein) 17 d1wfqa_ 68.3 21 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 18 c3d0fA_ 68.1 8 PDB header:transferase Chain: A: PDB Molecule:penicillin-binding 1 transmembrane protein mrca; PDBTitle: structure of the big_1156.2 domain of putative penicillin-binding2 protein mrca from nitrosomonas europaea atcc 19718 19 d2f5va2 62.8 23 Fold:FAD-linked reductases, C-terminal domain Superfamily:FAD-linked reductases, C-terminal domain Family:GMC oxidoreductases 20 c2vc8A_ 61.9 28 PDB header:protein-binding Chain: A: PDB Molecule:enhancer of mrna-decapping protein 3; PDBTitle: crystal structure of the lsm domain of human edc3 (enhancer2 of decapping 3) 21 c3mmlE_ not modelled 60.2 10 PDB header:hydrolase Chain: E: PDB Molecule:allophanate hydrolase subunit 2; PDBTitle: allophanate hydrolase complex from mycobacterium smegmatis, msmeg0435-2 msmeg0436 22 c3a0jB_ not modelled 57.8 20 PDB header:transcription Chain: B: PDB Molecule:cold shock protein; PDBTitle: crystal structure of cold shock protein 1 from thermus2 thermophilus hb8 23 c2khiA_ not modelled 56.0 14 PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s1; PDBTitle: nmr structure of the domain 4 of the e. coli ribosomal2 protein s1 24 d1wida_ not modelled 55.2 21 Fold:DNA-binding pseudobarrel domain Superfamily:DNA-binding pseudobarrel domain Family:B3 DNA binding domain 25 d1qbaa2 not modelled 48.9 23 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Carbohydrate-binding domain Family:Bacterial chitobiase, n-terminal domain 26 c3kf6B_ not modelled 47.6 29 PDB header:structural protein Chain: B: PDB Molecule:protein ten1; PDBTitle: crystal structure of s. pombe stn1-ten1 complex 27 d1x9la_ not modelled 43.4 17 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:DR1885-like metal-binding protein Family:DR1885-like metal-binding protein 28 d2ba0a1 not modelled 42.5 12 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 29 d1hh2p1 not modelled 39.8 23 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 30 c3u7zA_ not modelled 39.4 14 PDB header:metal binding protein Chain: A: PDB Molecule:putative metal binding protein rumgna_00854; PDBTitle: crystal structure of a putative metal binding protein rumgna_008542 (zp_02040092.1) from ruminococcus gnavus atcc 29149 at 1.30 a3 resolution 31 c2vzaD_ not modelled 38.9 31 PDB header:cell adhesion Chain: D: PDB Molecule:cell filamentation protein; PDBTitle: type iv secretion system effector protein bepa 32 c2ytyA_ not modelled 38.1 13 PDB header:rna binding protein Chain: A: PDB Molecule:cold shock domain-containing protein e1; PDBTitle: solution structure of the fourth cold-shock domain of the human2 kiaa0885 protein (unr protein) 33 c3m7aA_ not modelled 37.7 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of saro_0823 (yp_496102.1) a protein of2 unknown function from novosphingobium aromaticivorans dsm3 12444 at 1.22 a resolution 34 c3ayhB_ not modelled 36.6 19 PDB header:transcription Chain: B: PDB Molecule:dna-directed rna polymerase iii subunit rpc8; PDBTitle: crystal structure of the c17/25 subcomplex from s. pombe rna2 polymerase iii 35 d1wi5a_ not modelled 29.4 17 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 36 d1gvha2 not modelled 29.2 8 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 37 d1gyca1 not modelled 28.2 13 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 38 c2k6zA_ not modelled 28.1 21 PDB header:metal transport Chain: A: PDB Molecule:putative uncharacterized protein ttha1943; PDBTitle: solution structures of copper loaded form pcua (trans2 conformation of the peptide bond involving the nitrogen of3 p14) 39 c3i18A_ not modelled 27.7 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lmo2051 protein; PDBTitle: crystal structure of the pdz domain of the sdrc-like protein2 (lmo2051) from listeria monocytogenes, northeast structural3 genomics consortium target lmr166b 40 d2phcb1 not modelled 27.4 22 Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:PH0987 C-terminal domain-like 41 c2phcB_ not modelled 27.3 22 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein ph0987; PDBTitle: crystal structure of conserved uncharacterized protein ph0987 from2 pyrococcus horikoshii 42 d2f23a2 not modelled 25.6 10 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 43 c2h47C_ not modelled 25.6 29 PDB header:oxidoreductase/electron transport Chain: C: PDB Molecule:azurin; PDBTitle: crystal structure of an electron transfer complex between2 aromatic amine dephydrogenase and azurin from alcaligenes3 faecalis (form 1) 44 d1xnea_ not modelled 25.5 24 Fold:PUA domain-like Superfamily:PUA domain-like Family:ProFAR isomerase associated domain 45 d1qnia1 not modelled 25.2 25 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Nitrosocyanin 46 d1u0la1 not modelled 25.0 13 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 47 c1t9hA_ not modelled 24.1 21 PDB header:hydrolase Chain: A: PDB Molecule:probable gtpase engc; PDBTitle: the crystal structure of yloq, a circularly permuted gtpase. 48 d2f1la1 not modelled 23.9 35 Fold:PRC-barrel domain Superfamily:PRC-barrel domain Family:RimM C-terminal domain-like 49 c2rf4A_ not modelled 23.5 15 PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase i subunit rpa4; PDBTitle: crystal structure of the rna polymerase i subcomplex a14/43 50 c3mmlD_ not modelled 23.4 30 PDB header:hydrolase Chain: D: PDB Molecule:allophanate hydrolase subunit 1; PDBTitle: allophanate hydrolase complex from mycobacterium smegmatis, msmeg0435-2 msmeg0436 51 c3ie5A_ not modelled 22.3 11 PDB header:plant protein, biosynthetic protein Chain: A: PDB Molecule:phenolic oxidative coupling protein hyp-1; PDBTitle: crystal structure of hyp-1 protein from hypericum perforatum2 (st john's wort) involved in hypericin biosynthesis 52 d2cnda1 not modelled 21.5 11 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 53 d1v6ga2 not modelled 21.4 42 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 54 d1fwxa1 not modelled 20.8 25 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Nitrosocyanin 55 c2aanA_ not modelled 20.0 19 PDB header:electron transport Chain: A: PDB Molecule:auracyanin a; PDBTitle: auracyanin a: a "blue" copper protein from the green thermophilic2 photosynthetic bacterium,chloroflexus aurantiacus 56 c2khjA_ not modelled 19.7 15 PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s1; PDBTitle: nmr structure of the domain 6 of the e. coli ribosomal2 protein s1 57 d1tyeb1 not modelled 19.6 31 Fold:Immunoglobulin-like beta-sandwich Superfamily:Integrin domains Family:Integrin domains 58 d1cqxa2 not modelled 19.1 3 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 59 c2zp2B_ not modelled 19.1 44 PDB header:transferase inhibitor Chain: B: PDB Molecule:kinase a inhibitor; PDBTitle: c-terminal domain of kipi from bacillus subtilis 60 d1joia_ not modelled 18.8 13 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 61 d1t9ha1 not modelled 18.7 25 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 62 c2p4vA_ not modelled 18.3 13 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution 63 d2ccwa1 not modelled 18.2 13 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 64 d2c35b1 not modelled 17.8 17 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 65 d1ndha1 not modelled 17.4 18 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 66 c3oepA_ not modelled 17.2 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative uncharacterized protein ttha0988; PDBTitle: crystal structure of ttha0988 in space group p43212 67 d1cc3a_ not modelled 17.1 27 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 68 d1i94q_ not modelled 16.9 22 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 69 d1a5ra_ not modelled 16.3 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 70 d2etna2 not modelled 16.1 10 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 71 d2z0sa1 not modelled 16.0 17 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 72 d1ws8a_ not modelled 15.7 31 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 73 c2kjpA_ not modelled 15.4 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ylbl; PDBTitle: solution structure of protein ylbl (bsu15050) from bacillus2 subtilis, northeast structural genomics consortium target3 sr713a 74 d1t2wa_ not modelled 15.3 20 Fold:Sortase Superfamily:Sortase Family:Sortase 75 c3pjyB_ not modelled 15.0 15 PDB header:transcription regulator Chain: B: PDB Molecule:hypothetical signal peptide protein; PDBTitle: crystal structure of a putative transcription regulator (r01717) from2 sinorhizobium meliloti 1021 at 1.55 a resolution 76 d1k0ha_ not modelled 15.0 6 Fold:Phage tail proteins Superfamily:Phage tail proteins Family:gpFII-like 77 d1azca_ not modelled 14.9 14 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 78 d1q46a2 not modelled 14.9 10 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 79 d1gawa1 not modelled 14.8 15 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 80 c2w1kB_ not modelled 14.7 17 PDB header:transferase Chain: B: PDB Molecule:putative sortase; PDBTitle: crystal structure of sortase c-3 (srtc-3) from2 streptococcus pneumoniae 81 d2z9ia1 not modelled 14.5 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 82 d1jb9a1 not modelled 14.5 28 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 83 d1nppa2 not modelled 14.1 35 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:N-utilization substance G protein NusG, C-terminal domain 84 d1nz9a_ not modelled 14.0 35 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:N-utilization substance G protein NusG, C-terminal domain 85 c3qo6B_ not modelled 13.9 17 PDB header:photosynthesis Chain: B: PDB Molecule:protease do-like 1, chloroplastic; PDBTitle: crystal structure analysis of the plant protease deg1 86 d1qfza1 not modelled 13.6 19 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 87 d2gnra1 not modelled 13.3 10 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:SSO2064-like 88 c3mjjD_ not modelled 13.3 20 PDB header:hydrolase Chain: D: PDB Molecule:predicted acetamidase/formamidase; PDBTitle: crystal structure analysis of a recombinant predicted2 acetamidase/formamidase from the thermophile thermoanaerobacter3 tengcongensis 89 d2i6va1 not modelled 13.2 8 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:EpsC C-terminal domain-like 90 d1n67a1 not modelled 13.0 19 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Bacterial adhesins Family:Fibrinogen-binding domain 91 c2l66B_ not modelled 12.9 32 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, abrb family; PDBTitle: the dna-recognition fold of sso7c4 suggests a new member of spovt-abrb2 superfamily from archaea. 92 d1jzga_ not modelled 12.6 27 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 93 c2rcnA_ not modelled 12.5 15 PDB header:hydrolase Chain: A: PDB Molecule:probable gtpase engc; PDBTitle: crystal structure of the ribosomal interacting gtpase yjeq from the2 enterobacterial species salmonella typhimurium. 94 d1t3qb1 not modelled 12.2 12 Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like 95 c3ke2A_ not modelled 12.2 31 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein yp_928783.1; PDBTitle: crystal structure of a duf2131 family protein (sama_2911) from2 shewanella amazonensis sb2b at 2.50 a resolution 96 c3fp9E_ not modelled 12.1 29 PDB header:hydrolase Chain: E: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of intern domain of proteasome-associated2 atpase, mycobacterium tuberculosis 97 d1plaa_ not modelled 12.1 27 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 98 d1v10a2 not modelled 11.8 14 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 99 c2kw8A_ not modelled 11.8 13 PDB header:protein binding Chain: A: PDB Molecule:lpxtg-site transpeptidase family protein; PDBTitle: solution structure of bacillus anthracis sortase a (srta)2 transpeptidase