Email l.a.kelley@imperial.ac.uk Description P0AER5 Date Thu Jan 5 11:24:01 GMT 2012 Unique Job ID 486c4f11fec4a708

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2onkC_ 99.9 15 PDB header:membrane protein Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease PDBTitle: abc transporter modbc in complex with its binding protein2 moda 2 d2onkc1 99.9 15 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 3 d3d31c1 99.9 14 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 4 c3d31D_ 99.9 14 PDB header:transport protein Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease PDBTitle: modbc from methanosarcina acetivorans 5 c2r6gF_ 99.8 13 PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter 6 d2r6gf2 99.8 14 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 7 c3fh6F_ 99.8 12 PDB header:transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli 8 d2r6gg1 99.7 14 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 9 d3dhwa1 99.7 14 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 10 d1ntca_ 35.3 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 11 d1umqa_ 34.0 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 12 c1umqA_ 34.0 22 PDB header:dna-binding protein Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity 13 d1etob_ 32.3 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 14 d1fipa_ 32.0 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 15 d1etxa_ 27.0 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 16 c3e7lD_ 24.1 13 PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain 17 c2jwaA_ 23.1 6 PDB header:transferase Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2; PDBTitle: erbb2 transmembrane segment dimer spatial structure 18 d1g2ha_ 21.4 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 19 d2ns0a1 18.3 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:RHA1 ro06458-like 20 c2cw1A_ 17.8 43 PDB header:de novo protein Chain: A: PDB Molecule:sn4m; PDBTitle: solution structure of the de novo-designed lambda cro fold2 protein 21 c2hx6A_ not modelled 13.1 14 PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease; PDBTitle: solution structure analysis of the phage t42 endoribonuclease regb 22 c2d7dB_ not modelled 11.3 15 PDB header:hydrolase/dna Chain: B: PDB Molecule:40-mer from uvrabc system protein b; PDBTitle: structural insights into the cryptic dna dependent atp-ase2 activity of uvrb 23 d1i3ja_ not modelled 8.9 10 Fold:DNA-binding domain of intron-encoded endonucleases Superfamily:DNA-binding domain of intron-encoded endonucleases Family:DNA-binding domain of intron-encoded endonucleases 24 c3qkbB_ not modelled 8.7 9 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a protein with unknown function which belongs to2 pfam duf74 family (pepe_0654) from pediococcus pentosaceus atcc 257453 at 2.73 a resolution 25 c3iwcD_ not modelled 8.3 35 PDB header:lyase Chain: D: PDB Molecule:s-adenosylmethionine decarboxylase; PDBTitle: t. maritima adometdc complex with s-adenosylmethionine2 methyl ester 26 d1st6a6 not modelled 8.2 15 Fold:Four-helical up-and-down bundle Superfamily:alpha-catenin/vinculin-like Family:alpha-catenin/vinculin 27 d2auwa1 not modelled 8.0 26 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:NE0471 C-terminal domain-like 28 d1i1ga1 not modelled 7.9 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 29 d1x8da1 not modelled 7.9 7 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:YiiL-like 30 c2kvlA_ not modelled 7.8 8 PDB header:viral protein Chain: A: PDB Molecule:major outer capsid protein vp7; PDBTitle: nmr structure of the c-terminal domain of vp7 31 d1cf7a_ not modelled 7.6 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Cell cycle transcription factor e2f-dp 32 c1twcF_ not modelled 7.5 29 PDB header:transcription Chain: F: PDB Molecule:dna-directed rna polymerases i, ii, and iii 23 PDBTitle: rna polymerase ii complexed with gtp 33 d1twff_ not modelled 7.5 29 Fold:RPB6/omega subunit-like Superfamily:RPB6/omega subunit-like Family:RPB6 34 c2lhuA_ not modelled 7.4 19 PDB header:structural protein Chain: A: PDB Molecule:mybpc3 protein; PDBTitle: structural insight into the unique cardiac myosin binding protein-c2 motif: a partially folded domain 35 d1qkla_ not modelled 7.3 29 Fold:RPB6/omega subunit-like Superfamily:RPB6/omega subunit-like Family:RPB6 36 c2pmzW_ not modelled 7.3 14 PDB header:translation, transferase Chain: W: PDB Molecule:dna-directed rna polymerase subunit k; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus 37 c3s1bA_ not modelled 7.3 24 PDB header:signaling protein Chain: A: PDB Molecule:mini-z; PDBTitle: the development of peptide-based tools for the analysis of2 angiogenesis 38 c1ciiA_ not modelled 7.2 30 PDB header:transmembrane protein Chain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia 39 d2cg4a1 not modelled 7.1 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 40 d3orca_ not modelled 7.0 36 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 41 d2cyya1 not modelled 7.0 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 42 c1y2iC_ not modelled 7.0 27 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein s0862; PDBTitle: crystal structure of mcsg target apc27401 from shigella2 flexneri 43 d1y2ia_ not modelled 7.0 27 Fold:Dodecin subunit-like Superfamily:YbjQ-like Family:YbjQ-like 44 c2ks1B_ not modelled 6.9 7 PDB header:transferase Chain: B: PDB Molecule:epidermal growth factor receptor; PDBTitle: heterodimeric association of transmembrane domains of erbb1 and erbb22 receptors enabling kinase activation 45 d2hqva1 not modelled 6.9 8 Fold:Heme iron utilization protein-like Superfamily:Heme iron utilization protein-like Family:ChuX-like 46 d2obpa1 not modelled 6.8 23 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ReutB4095-like 47 c2nq2A_ not modelled 6.8 11 PDB header:metal transport Chain: A: PDB Molecule:hypothetical abc transporter permease protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter. 48 d1se7a_ not modelled 6.7 40 Fold:DNA polymerase III theta subunit-like Superfamily:DNA polymerase III theta subunit-like Family:DNA polymerase III theta subunit-like 49 d2cfxa1 not modelled 6.6 6 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 50 c2qlxA_ not modelled 6.6 11 PDB header:isomerase Chain: A: PDB Molecule:l-rhamnose mutarotase; PDBTitle: crystal structure of rhamnose mutarotase rhau of rhizobium2 leguminosarum in complex with l-rhamnose 51 c2qlwA_ not modelled 6.6 11 PDB header:isomerase Chain: A: PDB Molecule:rhau; PDBTitle: crystal structure of rhamnose mutarotase rhau of rhizobium2 leguminosarum 52 d1vr4a1 not modelled 6.4 9 Fold:Dodecin subunit-like Superfamily:YbjQ-like Family:YbjQ-like 53 d1sdia_ not modelled 6.4 23 Fold:YcfC-like Superfamily:YcfC-like Family:YcfC-like 54 c2auwB_ not modelled 6.4 19 PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein ne0471; PDBTitle: crystal structure of putative dna binding protein ne0471 from2 nitrosomonas europaea atcc 19718 55 c2zihC_ not modelled 6.4 6 PDB header:protein transport Chain: C: PDB Molecule:vacuolar protein sorting-associated protein 74; PDBTitle: crystal structure of yeast vps74 56 d1v54g_ not modelled 6.4 12 Fold:Single transmembrane helix Superfamily:Mitochondrial cytochrome c oxidase subunit VIa Family:Mitochondrial cytochrome c oxidase subunit VIa 57 d1brwa3 not modelled 6.4 24 Fold:alpha/beta-Hammerhead Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain Family:Pyrimidine nucleoside phosphorylase C-terminal domain 58 c2i88A_ not modelled 6.4 24 PDB header:membrane protein Chain: A: PDB Molecule:colicin-e1; PDBTitle: crystal structure of the channel-forming domain of colicin2 e1 59 c2ziiA_ not modelled 6.3 6 PDB header:protein transport Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 74; PDBTitle: crystal structure of yeast vps74-n-term truncation variant 60 d2o3aa1 not modelled 6.3 33 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:AF0751-like 61 d1o8ca2 not modelled 6.3 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 62 c2kz3A_ not modelled 6.3 18 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein rad51l3; PDBTitle: backbone 1h, 13c, and 15n chemical shift assignments for human rad51d2 from 1 to 83 63 d1h6gb1 not modelled 6.3 19 Fold:Four-helical up-and-down bundle Superfamily:alpha-catenin/vinculin-like Family:alpha-catenin/vinculin 64 d2phcb1 not modelled 6.2 8 Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:PH0987 C-terminal domain-like 65 c2yy8B_ not modelled 6.2 33 PDB header:transferase Chain: B: PDB Molecule:upf0106 protein ph0461; PDBTitle: crystal structure of archaeal trna-methylase for position2 56 (atrm56) from pyrococcus horikoshii, complexed with s-3 adenosyl-l-methionine 66 d2tpta3 not modelled 6.2 29 Fold:alpha/beta-Hammerhead Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain Family:Pyrimidine nucleoside phosphorylase C-terminal domain 67 c1pyuD_ not modelled 6.1 31 PDB header:lyase Chain: D: PDB Molecule:aspartate 1-decarboxylase alfa chain; PDBTitle: processed aspartate decarboxylase mutant with ser25 mutated to cys 68 c2vn2B_ not modelled 6.1 14 PDB header:replication Chain: B: PDB Molecule:chromosome replication initiation protein; PDBTitle: crystal structure of the n-terminal domain of dnad protein2 from geobacillus kaustophilus hta426 69 c1piiA_ not modelled 6.0 20 PDB header:bifunctional(isomerase and synthase) Chain: A: PDB Molecule:n-(5'phosphoribosyl)anthranilate isomerase; PDBTitle: three-dimensional structure of the bifunctional enzyme2 phosphoribosylanthranilate isomerase:3 indoleglycerolphosphate synthase from escherichia coli4 refined at 2.0 angstroms resolution 70 c1rkcB_ not modelled 6.0 11 PDB header:cell adhesion, structural protein Chain: B: PDB Molecule:talin; PDBTitle: human vinculin head (1-258) in complex with talin's2 vinculin binding site 3 (residues 1944-1969) 71 d1jhfa1 not modelled 6.0 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:LexA repressor, N-terminal DNA-binding domain 72 c2gqqB_ not modelled 6.0 6 PDB header:transcription Chain: B: PDB Molecule:leucine-responsive regulatory protein; PDBTitle: crystal structure of e. coli leucine-responsive regulatory protein2 (lrp) 73 c3mmlD_ not modelled 5.9 17 PDB header:hydrolase Chain: D: PDB Molecule:allophanate hydrolase subunit 1; PDBTitle: allophanate hydrolase complex from mycobacterium smegmatis, msmeg0435-2 msmeg0436 74 c3h0gF_ not modelled 5.9 27 PDB header:transcription Chain: F: PDB Molecule:dna-directed rna polymerases i, ii, and iii PDBTitle: rna polymerase ii from schizosaccharomyces pombe 75 c1xwjB_ not modelled 5.9 11 PDB header:cell adhesion/protein binding Chain: B: PDB Molecule:talin; PDBTitle: vinculin head (1-258) in complex with the talin vinculin2 binding site 3 (1945-1969) 76 d1icha_ not modelled 5.9 5 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 77 c1ichA_ not modelled 5.9 5 PDB header:apoptosis Chain: A: PDB Molecule:tumor necrosis factor receptor-1; PDBTitle: solution structure of the tumor necrosis factor receptor-12 death domain 78 c2ka1A_ not modelled 5.8 11 PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles 79 c2ka2B_ not modelled 5.8 11 PDB header:membrane protein Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints 80 d1a53a_ not modelled 5.8 27 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Tryptophan biosynthesis enzymes 81 c2e75E_ not modelled 5.8 29 PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex with 2-nonyl-4-2 hydroxyquinoline n-oxide (nqno) from m.laminosus 82 c1vf5R_ not modelled 5.8 29 PDB header:photosynthesis Chain: R: PDB Molecule:protein pet l; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus 83 c2e74E_ not modelled 5.8 29 PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex from m.laminosus 84 c2e76E_ not modelled 5.8 29 PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus 85 d2e74e1 not modelled 5.8 29 Fold:Single transmembrane helix Superfamily:PetL subunit of the cytochrome b6f complex Family:PetL subunit of the cytochrome b6f complex 86 c2xa6B_ not modelled 5.7 21 PDB header:transcription Chain: B: PDB Molecule:kh domain-containing\,rna-binding\,signal PDBTitle: structural basis for homodimerization of the src-associated2 during mitosis, 68 kd protein (sam68) qua1 domain 87 c2ka2A_ not modelled 5.7 16 PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints 88 c2ka1B_ not modelled 5.7 16 PDB header:membrane protein Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles 89 c3lpeF_ not modelled 5.7 25 PDB header:transferase Chain: F: PDB Molecule:dna-directed rna polymerase subunit e''; PDBTitle: crystal structure of spt4/5ngn heterodimer complex from methanococcus2 jannaschii 90 d1nyoa_ not modelled 5.7 3 Fold:FAS1 domain Superfamily:FAS1 domain Family:FAS1 domain 91 c2ijlB_ not modelled 5.6 20 PDB header:transcription Chain: B: PDB Molecule:molybdenum-binding transcriptional repressor; PDBTitle: the structure of a putative mode from agrobacterium tumefaciens. 92 d1vf5c3 not modelled 5.6 17 Fold:Single transmembrane helix Superfamily:Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Family:Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 93 c2zp2B_ not modelled 5.5 4 PDB header:transferase inhibitor Chain: B: PDB Molecule:kinase a inhibitor; PDBTitle: c-terminal domain of kipi from bacillus subtilis 94 d1l7va_ not modelled 5.5 13 Fold:ABC transporter involved in vitamin B12 uptake, BtuC Superfamily:ABC transporter involved in vitamin B12 uptake, BtuC Family:ABC transporter involved in vitamin B12 uptake, BtuC 95 c2kncA_ not modelled 5.5 16 PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 96 c1jd7A_ not modelled 5.5 13 PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase; PDBTitle: crystal structure analysis of the mutant k300r of2 pseudoalteromonas haloplanctis alpha-amylase 97 c3gebC_ not modelled 5.4 17 PDB header:hydrolase Chain: C: PDB Molecule:eyes absent homolog 2; PDBTitle: crystal structure of edeya2 98 c3gk0H_ not modelled 5.4 27 PDB header:transferase Chain: H: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic2 protein from burkholderia pseudomallei 99 c1vf5E_ not modelled 5.4 30 PDB header:photosynthesis Chain: E: PDB Molecule:protein pet l; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus