Job Description P75958 Confidence 97.53% Date Thu Jan 5 12:16:27 GMT 2012 Rank 2 Aligned Residues 145 % Identity 10% Template c3is6A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative permease protein, abc transporter; PDBTitle: the crystal structure of a domain of a putative permease protein from2 porphyromonas gingivalis to 2a Resolution 1.95 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.
Predicted Secondary structure																				.	.																																																											.
Query SS confidence																				.	.																																																											.
Query Sequence		Q	K	V	P	G	I	A	A	A	A	P	Y	I	N	F	T	G	L	.	.	V	E	S	G	A	N	L	R	A	I	Q	V	K	G	V	N	P	Q	Q	E	Q	R	L	S	A	L	P	S	F	V	Q	G	D	A	W	R	N	F	K	A	G	E	Q	Q	I	I	I	G	K	G	V	A	D	A	L	K	V	K	.	Q
Query Conservation																				.	.																																																											.
Alig confidence																				.	.																															.	.	.																										.
Template Conservation																																																				.	.	.
Template Sequence		E	E	I	P	G	V	E	L	A	T	R	T	T	L	Y	G	T	S	K	X	I	L	E	D	N	K	T	Y	E	T	K	T	L	L	A	E	P	A	F	L	D	X	F	G	V	E	L	I	A	G	.	.	.	V	R	D	S	A	L	R	D	N	X	T	C	L	I	S	E	S	L	A	R	K	X	G	G	D	V	L
Template Known Secondary structure					T	T																		T	T	T												T						T	T							.	.	.		G	G	G	T	T		S	T	T												T	T	S			T
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		G	D	W	V	S	I	M	I	P	N	S	N	P	E	H	K	L	M	Q	P	K	R	V	R	L	H	V	A	G	I	L	Q	L	S	G	Q	L	D	H	S	F	A	.	.	.	.	.	M	I	P	L	A	D	A	Q	Q	Y	L	D	M	G	S	S	V	S	G	I	A	L	K	M	T	D	V	F	N	A	N	K	L
Query Conservation																																												.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	R	L	R	P	A	E	S	K	S	D	.	.	.	.	.	.	.	.	.	.	R	A	I	T	I	G	G	V	F	E	D	L	P	H	N	S	S	I	Q	A	D	X	L	L	P	I	T	W	X	P	A	E	S	L	N	N	W	I	G	N	D	R	Y	I	A	Y	V	R	L	R	P	G	V	S	P	E	S	L
Template Known Secondary structure		T						T	T			S	S	.	.	.	.	.	.	.	.	.	.														S	S	B	S				S					G	G	G	S						T			S	S				B								T	T			G	G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.											.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		238	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	D	A	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	A	L	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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