2 c3is6A_ Probab=97.53   E-value=0.0043  Score=34.93  Aligned_columns=145  Identities=10%

Q ss_pred             HCCCCCEEEEEEEEEEEE--EECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHCCCCCCEEEEEHHHHHHCCCC-C
Q ss_conf             659891248899874357--6047654431022204531554101222102677011356798799803577646997-5
Q batch____        86 QKVPGIAAAAPYINFTGL--VESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVK-Q  162 (414)
Q Consensus        86 ~~~~~V~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~~~~a~~~~~~-~  162 (414)
                      ++.|+|+.++........  ...+++........+++++++.++.....+   +.......++.++|++++|++++.. .
T Consensus        43 ~~~peVe~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ff~~f~~~~l~G---~~~~~l~~p~~vvise~~A~~~Fg~~~  119 (237)
T c3is6A_          43 EEIPGVELATRTTLYGTSKXILEDNKTYETKTLLAEPAFLDXFGVELIAG---VRDSALRDNXTCLISESLARKXGGDVL  119 (237)
T ss_dssp             HHCTTEEEEEEEEEEEEEEEEETTTEEEEEEEEEECTHHHHHTTCCEEEE---CGGGTTCSTTEEEEEHHHHHHTTSCCT
T ss_pred             HHCCCCEEEEEEEECCCCCEEECCCCEEEEEEEEECHHHHHHCCCCEEEC---CHHHHHCCCCEEEEEHHHHHHHCCCCC
T ss_conf             76904212899851377632404870776458998555665469635206---834530388379991889985438853


Q ss_pred             CCEEEEECCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCC-----CCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHH
Q ss_conf             540465326786304676313312798677512665555522-----368889998506665014777502773008999
Q batch____       163 GDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFA-----MIPLADAQQYLDMGSSVSGIALKMTDVFNANKL  237 (414)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (414)
                      |.........+.          ..++|+|+++..+.......     +....................+..++..+....
T Consensus       120 g~~~~~~~~~~~----------~~~~V~GV~~d~p~ns~~~~d~~~~~~~~~~~~~~~w~~~~~~~~yi~L~~g~d~~~~  189 (237)
T c3is6A_         120 GKRLRPAESKSD----------RAITIGGVFEDLPHNSSIQADXLLPITWXPAESLNNWIGNDRYIAYVRLRPGVSPESL  189 (237)
T ss_dssp             TCEEEETTCCSS----------CCEEEEEEECCCCSSBSCCCSEEEEGGGSCHHHHTCCSSCCCBEEEEEECTTCCGGGG
T ss_pred             CCEEEEEECCCC----------EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHH
T ss_conf             442789970896----------3699998413777678646451003444421144454568707999998699999999


Q ss_pred             HHHHHH
Q ss_conf             999873
Q batch____       238 VRDAGE  243 (414)
Q Consensus       238 ~~~~~~  243 (414)
                      .+++..
T Consensus       190 ~~~l~~  195 (237)
T c3is6A_         190 DEALLE  195 (237)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             999899