Job Description P16694 Confidence 97.14% Date Thu Jan 5 11:35:44 GMT 2012 Rank 246 Aligned Residues 236 % Identity 14% Template c1cipA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein (guanine nucleotide-binding protein PDBTitle: gi-alpha-1 subunit of guanine nucleotide-binding protein2 complexed with a gtp analogue Resolution 1.50 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																											.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	M	V	L	A	I	V	G	T	M	K	A	G	K	S	T	T	I	N	A	I	V	G	T	E	V	L	P	N	R	N	R	P	M	T	A	L	P	T	L	I	R	H	T	P	G	Q	K	E	P	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	V	K	L	L	L	L	G	A	G	E	S	G	K	S	T	I	V	K	Q	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	I	H	E	A	G	Y	S	E	E	E	C	K	Q	Y	K	A	V	V	Y	S	N	T	I	Q	S	I	I	A	I	I	R	A	M	G	R	L	K	I
Template Known Secondary structure											S	T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S											T																							T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	H	V	A	P	I	D	C	L	I	Q	Q	L	Q	Q	R	L	R	D	C	D	I	K	H	L	T	D	V	L	E	I	D	K	D	M	R	A	L	M	Q	R	I	E	N	G	V	A	F	E	K	Y	Y	L	G	A	Q	P	I	F	H	C	L	K	S	L	N	D	L	V	R	L	A	K	A	L	D	V	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	G	D	A	A	R	A	D	D	A	R	Q	L	F	V	L	A	G	A	A	E	E	G	F	M	T	A	E	L	A	G	V	I	K	R	L	W	K	D	S	G	V	Q	A	C	F	N	R	S	R	E	Y	Q	L	N	D	S	A	A	Y	Y	L	N	D	L	D	R	I	A	Q	P	N	Y	I	P	T	Q	Q	D
Template Known Secondary structure				S	S	T	T																T	T	T																								T	T	G	G	G	S				T	T						T	T					T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	S	A	Y	A	A	I	E	H	I	P	V	I	E	V	E	F	V	H	L	A	G	L	E	S	Y	P	G	Q	L	T	L	L	D	T	P	G	P	N	E	A	G	Q	P	H	L	Q	K	M	L	N	Q	Q	L	A	R	A	S	A	V	L	A	V	L	D	Y	T	Q	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.															.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		V	L	R	T	R	V	K	T	T	G	I	V	E	T	H	F	T	F	K	.	.	.	.	.	.	.	.	D	L	H	F	K	M	F	D	V	G	G	Q	R	S	.	.	.	.	.	E	R	K	K	W	I	H	C	F	E	G	V	T	A	I	I	F	C	V	A	L	S	D	Y	D	L	V	L	A	E	D	E	E	M
Template Known Secondary structure				T							S									T	.	.	.	.	.	.	.	.	T											S	G	G	.	.	.	.	.	G	G	G	G	G	G	G	G		T	T		S								G	G	G	G	G				T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.									.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.																	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence																		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		L	K	S	I	S	D	E	E	V	R	E	A	I	L	A	V	.	.	G	Q	S	V	P	L	Y	V	L	V	N	K	F	D	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	N	S	D	D	A	D	Q	V	R	A	L	I	S	G	T	L	M	K	G	C	I	T	P	Q	Q	.	.	.
Query Conservation																		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Alig confidence																		.	.															.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																																		.
Template Sequence		N	R	M	H	E	S	M	K	L	F	D	S	I	C	N	N	K	W	F	T	D	T	S	I	I	L	F	L	N	K	K	D	.	L	F	E	E	K	I	K	K	S	P	L	T	I	C	Y	P	E	Y	A	G	S	N	T	Y	E	E	A	A	A	Y	I	Q	C	Q	F	E	D	L	N	K	R	K	D	T	K	E	I
Template Known Secondary structure																T		G	G	G	T	T	S											.							T	T	S		G	G	G	T		T	T			S		S															T	T		S		T	T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
			330	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	F	P	V	S	S
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		Y	T	H	F	T	C	A
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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