Job Description P00887 Confidence 98.04% Date Thu Jan 5 10:56:58 GMT 2012 Rank 21 Aligned Residues 247 % Identity 15% Template c1vliA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution Resolution 2.38 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		I	E	K	I	L	N	G	E	D	K	R	L	L	V	I	I	G	P	C	S	I	H	.	.	D	L	T	A	A	M	E	Y	A	T	R	L	Q	S	L	R	N	Q	Y	Q	S	R	L	E	I	V	M	R	T	Y	F	E	K	P	R	T	V	V	G	W	K	G	L	I	S	D	P	D	L	N	G	S	Y	R	V	N
Query Conservation																								.	.
Alig confidence																								.	.																			.	.	.	.	.																		.	.	.	.
Template Conservation																																												.	.	.	.	.																		.	.	.	.
Template Sequence		I	A	N	K	T	V	G	K	D	A	P	V	F	I	I	A	E	A	G	I	N	H	D	G	K	L	D	Q	A	F	A	L	I	D	A	A	A	E	A	G	A	D	.	.	.	.	.	A	V	K	F	Q	X	F	Q	A	D	R	X	Y	Q	K	D	P	.	.	.	.	D	V	S	I	F	S	L	V	Q	S	X	E
Template Known Secondary structure			T	T					T	T	S										T	T	T	T	T																T		S	.	.	.	.	.							B		G	G	G	G	T	S				.	.	.	.								G	G	G	B	S
Template Predicted Secondary structure																																												.	.	.	.	.																		.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		H	G	L	E	L	A	R	K	L	L	L	Q	V	N	E	L	G	V	P	T	A	T	E	F	L	D	M	V	T	G	Q	F	I	A	D	L	.	I	S	W	G	A	I	G	A	R	T	T	E	S	Q	I	H	R	E	M	A	S	A	L	S	C	P	V	G	F	K	N	G	T	D	G	N	T	R	I	A	V	D	A
Query Conservation																																						.
Alig confidence																																						.																																		.
Template Conservation																																																																								.
Template Sequence		X	P	A	E	W	I	L	P	L	L	D	Y	C	R	E	K	Q	V	I	F	L	S	T	V	C	D	E	G	S	A	D	L	L	Q	S	T	S	P	S	A	F	K	I	A	S	Y	E	I	N	H	L	P	L	L	K	Y	V	A	R	L	N	R	P	X	I	F	S	T	A	G	.	A	E	I	S	D	V	H	E	A
Template Known Secondary structure		S		G	G	G											T	T						B			S									T	T			S						G	G	G	T	T										T	T		S							T	T	.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																		.	.								.
Query SS confidence																																		.	.								.
Query Sequence		I	R	A	A	R	A	S	H	M	F	L	S	P	D	K	N	G	Q	M	T	I	Y	Q	T	S	G	N	P	Y	G	H	I	.	.	I	M	R	G	G	K	K	.	P	N	Y	H	A	D	D	I	A	A	A	C	D	T	L	H	E	F	D	L	P	E	H	L	V	V	D	F	S	H	G	N	C	Q	K	Q	H	R
Query Conservation																																		.	.								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.								.																	.	.	.	.															.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.															.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	R	T	I	R	A	E	G	N	N	Q	I	A	I	X	H	C	V	A	K	Y	P	A	P	P	E	Y	S	N	L	S	V	I	P	X	L	A	A	A	F	.	.	.	.	P	E	A	V	I	G	F	S	D	H	S	E	H	P	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T											S	S	S	S			G	G	G			T	T									S	.	.	.	.	T	T	S									S	S	S	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.															.	.	.	.
Template SS confidence
																				165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	L	E	V	C	E	D	I	C	Q	Q	I	R	N	G	S	T	A	I	A	G	I	M	A	E	S	F	L	R	E	G	T	Q	K	I	V	G	S	Q	P	L	T	Y	G	Q	S	I	T	D	P	C	L	G	W	E	D	T	E	R	L	V	E	K	L	A	S	A
Query Conservation
Alig confidence		.	.	.	.	.															.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.															.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	T	E	A	P	C	A	A	V	R	L	G	A	K	L	.	.	.	.	.	I	E	K	H	F	T	I	D	K	N	L	P	G	A	D	H	.	.	.	.	.	.	.	.	.	S	F	A	L	N	P	D	E	L	K	E	X	V	D	G	I	R	K	T
Template Known Secondary structure		.	.	.	.	.	S									T	T		S		.	.	.	.	.					B		S		T	T	S	S		S	S		.	.	.	.	.	.	.	.	.	T	T	S	B
Template Predicted Secondary structure		.	.	.	.	.															.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
							219	220	.	.	.	.	.	.	.	.	.	230	.	.						.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.										.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions