21 c1vliA_ Probab=98.04   E-value=0.00023  Score=47.34  Aligned_columns=247  Identities=15%

Q ss_pred             HHHHHCCCCCEEEEEECCCCCC--CHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             9998738887479997478688--86899999999999887412476999972211486326655334588666766987
Q batch____        42 IEKILNGEDKRLLVIIGPCSIH--DLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVGWKGLISDPDLNGSYRVN  119 (348)
Q Consensus        42 i~~Il~g~D~rllVI~GPCSI~--d~~~a~eyA~~L~~l~~~~~~~l~ivmR~y~eKPRT~vGwKGli~DP~~~~~~~i~  119 (348)
                      |.+...|.+++-+||+-=+.-|  |.+.|++.....++.+..     .+=+-+|.-.-.++-++    ..++.+.--..+
T Consensus         5 I~~~~ig~~~~~~IIAEig~NH~Gdl~~A~~lI~~A~~aGad-----aVKFQt~~~~~~~~~~~----~~~~~~~~~~~e   75 (358)
T c1vliA_           5 IANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGAD-----AVKFQXFQADRXYQKDP----DVSIFSLVQSXE   75 (358)
T ss_dssp             ETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCS-----EEEECCBCGGGGTSCCC----CCCHHHHGGGBS
T ss_pred             ECCEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC-----EEEEECCCCCCCCCCCC----CCCHHHHHHHCC
T ss_conf             888985799965999762203578789999999999971997-----89842014210015655----630457775316


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEHHCCCCCHHHHHHH-HHHEEECCCCCCCHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
Q ss_conf             769999999998874398224022170258999976-5220325634235899998517898447415899889999999
Q batch____       120 HGLELARKLLLQVNELGVPTATEFLDMVTGQFIADL-ISWGAIGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDA  198 (348)
Q Consensus       120 ~GL~~~R~L~~~~~~~GlpiatE~ld~~~~~yv~dl-vs~~~IGARt~esQ~hre~ASgl~~PVgfKNgt~g~i~~ai~A  198 (348)
                      -...+.++|.....+.|+...+...|...++++.++ +....|+++...+..+.+.+...++||-+..|+ .++++.-.|
T Consensus        76 l~~e~~~~L~~~~~~~Gi~f~sTpfd~~svd~l~~~~v~~~KIaS~el~n~pLL~~~A~~gkPvilSTGm-atl~Ei~~A  154 (358)
T c1vliA_          76 XPAEWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPXIFSTAG-AEISDVHEA  154 (358)
T ss_dssp             SCGGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTT-CCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEECHHHCCCHHHHHHHHHCCCCEEEECCC-CCHHHHHHH
T ss_conf             9989999999999975982998347999999998639986998412279889999996318971851354-688999999


Q ss_pred             HHHHCCCCEEEEECCCCCEEEEEECCCCCEEE--EEECCCC-CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
Q ss_conf             98502885486345888489997179982699--9646889-99980248999999997499987899567666872201
Q batch____       199 IRAARASHMFLSPDKNGQMTIYQTSGNPYGHI--IMRGGKK-PNYHADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHR  275 (348)
Q Consensus       199 i~aa~~~H~fl~v~~~G~~~~i~T~GN~d~hl--iLRGg~~-pNY~~~~v~~~~~~l~~~~~~~~iivD~SHgNs~K~~~  275 (348)
                                        ++++...||++..+  |-.+=.+ ++.-.-.........-    +..++-..+|--++    
T Consensus       155 ------------------v~~i~~~g~~~i~llhC~s~YP~p~~~~nL~~i~~L~~~f----~~~~vG~SDHt~g~----  208 (358)
T c1vliA_         155 ------------------WRTIRAEGNNQIAIXHCVAKYPAPPEYSNLSVIPXLAAAF----PEAVIGFSDHSEHP----  208 (358)
T ss_dssp             ------------------HHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHS----TTSEEEEEECCSSS----
T ss_pred             ------------------HHHHHHCCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHC----CCCEECCCCCCCCC----
T ss_conf             ------------------9999967998489995588889886673746789999751----78602147766554----


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHH
Q ss_conf             23899999999985362147489998312676557787566336730103557857899999999998
Q batch____       276 RQLEVCEDICQQIRNGSTAIAGIMAESFLREGTQKIVGSQPLTYGQSITDPCLGWEDTERLVEKLASA  343 (348)
Q Consensus       276 ~Q~~v~~~i~~q~~~g~~~i~GvMIES~l~~G~Q~~~~~~~l~yG~SITD~Ci~w~~Te~~l~~la~a  343 (348)
                           +...+...+.|..-     ||-|+...+..-.++.         -.++.-++..+++..+.++
T Consensus       209 -----~~~~~aAvalGA~v-----IEKHftldk~~~G~Dh---------~~Sl~P~el~~lv~~ir~~  257 (358)
T c1vliA_         209 -----TEAPCAAVRLGAKL-----IEKHFTIDKNLPGADH---------SFALNPDELKEXVDGIRKT  257 (358)
T ss_dssp             -----SHHHHHHHHTTCSE-----EEEEBCSCTTSSCSSC---------TTSBCHHHHHHHHHHHHHH
T ss_pred             -----CHHHHHHHHCCCEE-----EEEEECCCCCCCCCCE---------EEECCHHHHHHHHHHHHHH
T ss_conf             -----03568886303000-----0224214634789980---------2333879999999999999