Email l.a.kelley@imperial.ac.uk Description P0A6S0 Date Thu Jan 5 11:03:46 GMT 2012 Unique Job ID 395ac949a8a281a0

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1ah9a_ 61.4 26 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 2 c3i4oA_ 57.8 17 PDB header:translation Chain: A: PDB Molecule:translation initiation factor if-1; PDBTitle: crystal structure of translation initiation factor 1 from2 mycobacterium tuberculosis 3 d1m9sa4 51.1 19 Fold:SH3-like barrel Superfamily:Prokaryotic SH3-related domain Family:GW domain 4 d1tt2a_ 49.4 12 Fold:OB-fold Superfamily:Staphylococcal nuclease Family:Staphylococcal nuclease 5 c3bdlA_ 48.0 25 PDB header:hydrolase Chain: A: PDB Molecule:staphylococcal nuclease domain-containing PDBTitle: crystal structure of a truncated human tudor-sn 6 d2ix0a3 35.4 11 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 7 d2ijra1 32.7 27 Fold:Api92-like Superfamily:Api92-like Family:Api92-like 8 d1snoa_ 29.7 12 Fold:OB-fold Superfamily:Staphylococcal nuclease Family:Staphylococcal nuclease 9 c3etcB_ 29.6 32 PDB header:ligase Chain: B: PDB Molecule:amp-binding protein; PDBTitle: 2.1 a structure of acyl-adenylate synthetase from methanosarcina2 acetivorans containing a link between lys256 and cys298 10 d1khca_ 26.7 24 Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:PWWP domain 11 c2yyjA_ 24.4 19 PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxyphenylacetate-3-hydroxylase; PDBTitle: crystal structure of the oxygenase component (hpab) of 4-2 hydroxyphenylacetate 3-monooxygenase complexed with fad and 4-3 hydroxyphenylacetate 12 c3pzvB_ 24.3 22 PDB header:hydrolase Chain: B: PDB Molecule:endoglucanase; PDBTitle: c2 crystal form of the endo-1,4-beta-glucanase from bacillus subtilis2 168 13 d1vlba3 23.2 22 Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like 14 d1dgja3 22.4 30 Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like 15 c3f8tA_ 22.3 13 PDB header:hydrolase Chain: A: PDB Molecule:predicted atpase involved in replication control, PDBTitle: crystal structure analysis of a full-length mcm homolog2 from methanopyrus kandleri 16 c3izcG_ 22.0 25 PDB header:ribosome Chain: G: PDB Molecule:60s ribosomal protein rpl6 (l6e); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 17 d1nbwa2 21.9 27 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ATPase domain of dehydratase reactivase alpha subunit 18 c2l66B_ 21.8 23 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, abrb family; PDBTitle: the dna-recognition fold of sso7c4 suggests a new member of spovt-abrb2 superfamily from archaea. 19 c2dzcA_ 21.0 15 PDB header:ligase Chain: A: PDB Molecule:biotin--[acetyl-coa-carboxylase] ligase; PDBTitle: crystal structure of biotin protein ligase from pyrococcus2 horikoshii, mutation r48a 20 c3llrA_ 20.4 35 PDB header:transferase Chain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 3a; PDBTitle: crystal structure of the pwwp domain of human dna (cytosine-5-)-2 methyltransferase 3 alpha 21 d1hr0w_ not modelled 20.2 24 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 22 d1qupa2 not modelled 18.8 22 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 23 d1n62b1 not modelled 18.7 13 Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like 24 d1fvia1 not modelled 18.3 16 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA ligase/mRNA capping enzyme postcatalytic domain 25 c2wctC_ not modelled 18.0 25 PDB header:rna-binding protein Chain: C: PDB Molecule:non-structural protein 3; PDBTitle: human sars coronavirus unique domain (triclinic form) 26 d1m9sa2 not modelled 17.0 13 Fold:SH3-like barrel Superfamily:Prokaryotic SH3-related domain Family:GW domain 27 d1rkna_ not modelled 16.3 12 Fold:OB-fold Superfamily:Staphylococcal nuclease Family:Staphylococcal nuclease 28 d2k0bx1 not modelled 15.7 31 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 29 d1ng2a2 not modelled 13.2 14 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 30 d1ffvb1 not modelled 12.8 13 Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like 31 c2wj7D_ not modelled 12.8 14 PDB header:chaperone Chain: D: PDB Molecule:alpha-crystallin b chain; PDBTitle: human alphab crystallin 32 d1kj1a_ not modelled 12.6 27 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 33 c2b9kA_ not modelled 12.3 46 PDB header:antibiotic Chain: A: PDB Molecule:antimicrobial peptide lci; PDBTitle: solution structure of lci, an amp from bacillus subtilis 34 d2essa1 not modelled 12.0 7 Fold:Thioesterase/thiol ester dehydrase-isomerase Superfamily:Thioesterase/thiol ester dehydrase-isomerase Family:Acyl-ACP thioesterase-like 35 d1t3qb1 not modelled 12.0 26 Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like 36 d2hlja1 not modelled 11.9 9 Fold:Thioesterase/thiol ester dehydrase-isomerase Superfamily:Thioesterase/thiol ester dehydrase-isomerase Family:4HBT-like 37 d2soba_ not modelled 11.7 10 Fold:OB-fold Superfamily:Staphylococcal nuclease Family:Staphylococcal nuclease 38 c2crlA_ not modelled 11.5 7 PDB header:chaperone Chain: A: PDB Molecule:copper chaperone for superoxide dismutase; PDBTitle: the apo form of hma domain of copper chaperone for2 superoxide dismutase 39 d1tdja3 not modelled 11.2 31 Fold:Ferredoxin-like Superfamily:ACT-like Family:Allosteric threonine deaminase C-terminal domain 40 c3r0eD_ not modelled 11.1 15 PDB header:sugar binding protein Chain: D: PDB Molecule:lectin; PDBTitle: structure of remusatia vivipara lectin 41 c3mezB_ not modelled 10.6 36 PDB header:sugar binding protein Chain: B: PDB Molecule:mannose-specific lectin 3 chain 2; PDBTitle: x-ray structural analysis of a mannose specific lectin from dutch2 crocus (crocus vernus) 42 c2oi3A_ not modelled 10.5 15 PDB header:transferase Chain: A: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: nmr structure analysis of the hematopoetic cell kinase sh32 domain complexed with an artificial high affinity ligand3 (pd1) 43 d1cc8a_ not modelled 10.3 12 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 44 d1g2913 not modelled 10.2 17 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 45 c2ewnA_ not modelled 10.1 12 PDB header:ligase, transcription Chain: A: PDB Molecule:bira bifunctional protein; PDBTitle: ecoli biotin repressor with co-repressor analog 46 c3ipfA_ not modelled 9.6 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the q251q8_deshy protein from desulfitobacterium2 hafniense. northeast structural genomics consortium target dhr8c. 47 d1bwud_ not modelled 9.5 21 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 48 d1hnga1 not modelled 9.4 40 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:V set domains (antibody variable domain-like) 49 c2wgnB_ not modelled 9.4 25 PDB header:hydrolase inhibitor Chain: B: PDB Molecule:inhibitor of cysteine peptidase compnd 3; PDBTitle: pseudomonas aeruginosa icp 50 d7a3ha_ not modelled 9.2 17 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 51 c2kctA_ not modelled 9.1 21 PDB header:chaperone Chain: A: PDB Molecule:cytochrome c-type biogenesis protein ccme; PDBTitle: solution nmr structure of the ob-fold domain of heme2 chaperone ccme from desulfovibrio vulgaris. northeast3 structural genomics target dvr115g. 52 d1b2pa_ not modelled 9.1 12 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 53 d1vqoq1 not modelled 8.6 7 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal proteins L24p and L21e 54 c2dpfB_ not modelled 8.6 14 PDB header:plant protein Chain: B: PDB Molecule:curculin; PDBTitle: crystal structure of curculin1 homodimer 55 d1v25a_ not modelled 8.5 12 Fold:Acetyl-CoA synthetase-like Superfamily:Acetyl-CoA synthetase-like Family:Acetyl-CoA synthetase-like 56 c2zkrq_ not modelled 8.4 30 PDB header:ribosomal protein/rna Chain: Q: PDB Molecule:rna expansion segment es31 part ii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 57 c4a1dE_ not modelled 8.4 38 PDB header:ribosome Chain: E: PDB Molecule:rpl6; PDBTitle: t.thermophila 60s ribosomal subunit in complex with initiation2 factor 6. this file contains 26s rrna and proteins of3 molecule 4. 58 d1kj1d_ not modelled 8.2 29 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 59 c1s1iQ_ not modelled 8.2 22 PDB header:ribosome Chain: Q: PDB Molecule:60s ribosomal protein l21-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. 60 c3r0eC_ not modelled 8.2 36 PDB header:sugar binding protein Chain: C: PDB Molecule:lectin; PDBTitle: structure of remusatia vivipara lectin 61 c2eayB_ not modelled 8.2 20 PDB header:ligase Chain: B: PDB Molecule:biotin [acetyl-coa-carboxylase] ligase; PDBTitle: crystal structure of biotin protein ligase from aquifex2 aeolicus 62 c1w3gA_ not modelled 8.0 16 PDB header:toxin/lectin Chain: A: PDB Molecule:hemolytic lectin from laetiporus sulphureus; PDBTitle: hemolytic lectin from the mushroom laetiporus sulphureus2 complexed with two n-acetyllactosamine molecules. 63 d1jrob1 not modelled 7.9 13 Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like 64 c3iz5U_ not modelled 7.9 26 PDB header:ribosome Chain: U: PDB Molecule:60s ribosomal protein l21 (l21e); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 65 c2cghB_ not modelled 7.8 8 PDB header:ligase Chain: B: PDB Molecule:biotin ligase; PDBTitle: crystal structure of biotin ligase from mycobacterium2 tuberculosis 66 c4a1aP_ not modelled 7.7 13 PDB header:ribosome Chain: P: PDB Molecule:60s ribosomal protein l21; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3. 67 d1npla_ not modelled 7.7 20 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 68 d1kafa_ not modelled 7.7 29 Fold:MotA C-terminal domain-like Superfamily:DNA-binding C-terminal domain of the transcription factor MotA Family:DNA-binding C-terminal domain of the transcription factor MotA 69 d1khda2 not modelled 7.6 19 Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 70 c3elqA_ not modelled 7.6 18 PDB header:transferase Chain: A: PDB Molecule:arylsulfate sulfotransferase; PDBTitle: crystal structure of a bacterial arylsulfate2 sulfotransferase 71 d1hnfa1 not modelled 7.6 14 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:V set domains (antibody variable domain-like) 72 c3m86B_ not modelled 7.4 31 PDB header:protein binding Chain: B: PDB Molecule:amoebiasin-2; PDBTitle: crystal structure of the cysteine protease inhibitor, ehicp2, from2 entamoeba histolytica 73 d1bwua_ not modelled 7.4 21 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 74 d2joya1 not modelled 7.4 13 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal protein L14e 75 c2w54F_ not modelled 7.4 13 PDB header:oxidoreductase Chain: F: PDB Molecule:xanthine dehydrogenase; PDBTitle: crystal structure of xanthine dehydrogenase from2 rhodobacter capsulatus in complex with bound inhibitor3 pterin-6-aldehyde 76 c3izcU_ not modelled 7.4 22 PDB header:ribosome Chain: U: PDB Molecule:60s ribosomal protein rpl21 (l21e); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 77 d1d7qa_ not modelled 7.3 18 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 78 d2elca2 not modelled 7.3 19 Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 79 c2imzA_ not modelled 7.2 7 PDB header:hydrolase Chain: A: PDB Molecule:endonuclease pi-mtui; PDBTitle: crystal structure of mtu reca intein splicing domain 80 c3ij3A_ not modelled 7.1 25 PDB header:hydrolase Chain: A: PDB Molecule:cytosol aminopeptidase; PDBTitle: 1.8 angstrom resolution crystal structure of cytosol aminopeptidase2 from coxiella burnetii 81 d1jpca_ not modelled 7.1 20 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 82 c2oqkA_ not modelled 7.1 19 PDB header:translation Chain: A: PDB Molecule:putative translation initiation factor eif-1a; PDBTitle: crystal structure of putative cryptosporidium parvum translation2 initiation factor eif-1a 83 c2dbkA_ not modelled 7.0 12 PDB header:signaling protein Chain: A: PDB Molecule:crk-like protein; PDBTitle: solution structures of the sh3 domain of human crk-like2 protein 84 d1oxxk1 not modelled 7.0 22 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 85 c2klrA_ not modelled 6.9 14 PDB header:chaperone Chain: A: PDB Molecule:alpha-crystallin b chain; PDBTitle: solid-state nmr structure of the alpha-crystallin domain in alphab-2 crystallin oligomers 86 d1l4zb_ not modelled 6.9 26 Fold:beta-Grasp (ubiquitin-like) Superfamily:Staphylokinase/streptokinase Family:Staphylokinase/streptokinase 87 c2k5hA_ not modelled 6.8 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein; PDBTitle: solution nmr structure of protein encoded by mth693 from2 methanobacterium thermoautotrophicum: northeast structural3 genomics consortium target tt824a 88 d2zjrm1 not modelled 6.8 27 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal protein L19 89 c1u8vA_ not modelled 6.7 20 PDB header:lyase, isomerase Chain: A: PDB Molecule:gamma-aminobutyrate metabolism PDBTitle: crystal structure of 4-hydroxybutyryl-coa dehydratase from2 clostridium aminobutyricum: radical catalysis involving a3 [4fe-4s] cluster and flavin 90 d2exda1 not modelled 6.7 20 Fold:OB-fold Superfamily:NfeD domain-like Family:NfeD domain-like 91 c1qupA_ not modelled 6.7 22 PDB header:chaperone Chain: A: PDB Molecule:superoxide dismutase 1 copper chaperone; PDBTitle: crystal structure of the copper chaperone for superoxide2 dismutase 92 c3iuwA_ not modelled 6.7 36 PDB header:rna binding protein Chain: A: PDB Molecule:activating signal cointegrator; PDBTitle: crystal structure of activating signal cointegrator (np_814290.1) from2 enterococcus faecalis v583 at 1.58 a resolution 93 c3iz5G_ not modelled 6.6 31 PDB header:ribosome Chain: G: PDB Molecule:60s ribosomal protein l6 (l6e); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 94 d1jt8a_ not modelled 6.5 16 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 95 c3h8gC_ not modelled 6.4 25 PDB header:hydrolase Chain: C: PDB Molecule:cytosol aminopeptidase; PDBTitle: bestatin complex structure of leucine aminopeptidase from pseudomonas2 putida 96 c2zs6B_ not modelled 6.4 22 PDB header:toxin Chain: B: PDB Molecule:hemagglutinin components ha3; PDBTitle: ha3 subcomponent of botulinum type c progenitor toxin 97 c2e4mC_ not modelled 6.3 44 PDB header:toxin Chain: C: PDB Molecule:ha-17; PDBTitle: crystal structure of hemagglutinin subcomponent complex (ha-2 33/ha-17) from clostridium botulinum serotype d strain 4947 98 d1v97a3 not modelled 6.3 13 Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like 99 d3b9jc1 not modelled 6.1 13 Fold:alpha/beta-Hammerhead Superfamily:CO dehydrogenase molybdoprotein N-domain-like Family:CO dehydrogenase molybdoprotein N-domain-like