PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3iz5G_

Fold library id	PDB Header	Molecule	Title
c3iz5G_	PDB header: ribosome	Chain: G: PDB Molecule: 60s ribosomal protein l6 (l6e);	PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome

Links to external resources
Added to library: Sat Dec 11 13:55:52 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M A P T S K M A L G I K R A S R S H T Y H R R G L W A I K A K H G G A L P K A E K P A A I A E P K F Y P A D D V K P R T V S T R K P H P T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
S
T
S S
S S T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L R S T I T P G T V L I L L A G R Y M G K R V V F L K Q L Q S G L L L I T G P F K I N G V P I R R V N Q A Y V I A T S T K V D I S K V N V Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S S S S S S
S S S S S
S S S
S S S S
S
S
S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K F D D K Y F A R E K K T R A K K T E G E L F E S D K E A T K N L P D F K K D D Q K V I D A E L I K A I D A V P D L K N Y L G A R F S L R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S
T
S
S
T

. . . . . . . . .

Sequence G D K P H E M T F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	A	P	T	S	K	M	A	L	G	I	K	R	A	S	R	S	H	T	Y	H	R	R	G	L	W	A	I	K	A	K	H	G	G	A	L	P	K	A	E	K	P	A	A	I	A	E	P	K	F	Y	P	A	D	D	V	K	P	R	T	V	S	T	R	K	P	H	P	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	S															S		T															S	S							S	S	T	T										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	R	S	T	I	T	P	G	T	V	L	I	L	L	A	G	R	Y	M	G	K	R	V	V	F	L	K	Q	L	Q	S	G	L	L	L	I	T	G	P	F	K	I	N	G	V	P	I	R	R	V	N	Q	A	Y	V	I	A	T	S	T	K	V	D	I	S	K	V	N	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S			S					S	S	S	S	S	S										S	S	S	S	S								S	S	S								S	S	S	S					S				S		S	S				S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	F	D	D	K	Y	F	A	R	E	K	K	T	R	A	K	K	T	E	G	E	L	F	E	S	D	K	E	A	T	K	N	L	P	D	F	K	K	D	D	Q	K	V	I	D	A	E	L	I	K	A	I	D	A	V	P	D	L	K	N	Y	L	G	A	R	F	S	L	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				S	S																									S		T											S				S										T
	.	.	.	.	.	.	.	.	.
Sequence	G	D	K	P	H	E	M	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S	S	S