Job Description P0A7W7 Confidence 100.00% Date Thu Jan 5 11:06:21 GMT 2012 Rank 3 Aligned Residues 126 % Identity 50% Template c3rf2A_ PDB info PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s8; PDBTitle: crystal structure of 30s ribosomal protein s8 from aquifex aeolicus Resolution 2.16 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	D	P	I	A	D	M	L	T	R	I	R	N	G	Q	A	A	N	K	A	A	V	T	M	P	S	S	K	L	K	V	A	I	A	N	V	L	K	E	E	G	F	I	E	D	F	K	V	E	G	D	T	K	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	P	I	A	D	M	F	S	A	I	K	N	A	I	M	R	R	D	D	F	L	Y	V	P	S	S	K	L	K	E	R	I	L	D	V	L	K	K	E	G	F	I	Q	D	W	E	A	L	K	G	E	K	Y	E	E	E	Y	K	K	M	K	E	L	A	E	K	S	P	N	P	K	M	K	R	Y	L	K	Q	L
Template Known Secondary structure																		T	T		S																					T	S																									S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
												59	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.									.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.									.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	L	E	L	T	L	K	Y	F	.	.	.	Q	G	K	A	V	V	E	S	I	Q	R	V	S	R	P	G	L	R	I	Y	K	R	K	D	E	L	P	K	V	M	A	G	L	G	I	A	V	V	S	T	S	K	G	V	M	T	D	R	A	A	R	Q	A	G	L	G	G	E	I
Query Conservation		.	.	.	.	.	.	.	.	.	.									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.									.	.	.
Template Conservation
Template Sequence		E	E	Y	N	K	G	T	Q	Y	P	I	K	I	Y	L	K	Y	L	D	P	K	K	R	K	S	A	I	T	N	I	V	K	V	S	K	G	G	R	R	V	Y	A	G	V	R	T	M	P	Y	V	K	R	G	L	G	I	A	I	V	S	T	D	A	G	V	M	T	D	H	E	A	R	R	M	R	K	G	G	E	V
Template Known Secondary structure				T	T	S	T	T										B	S	S	T	T	S		S	B	S		S						S		S	S	S						S	T	T				S	G	G	G	T	S							T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		126	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	F	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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