3 c3rf2A_ Probab=100.00  E-value=0  Score=298.95  Aligned_columns=126  Identities=50%

Q ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCE-------------------------
Q ss_conf             0279999966344774587379984326699999999986984756993168726-------------------------
Q batch____         4 QDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPE-------------------------   58 (130)
Q Consensus         4 ~d~iad~l~~I~Na~~~~~~~v~ip~Sk~~~~il~iL~~eGyI~~~~~~~~~~~~-------------------------   58 (130)
                      +|||||||||||||++|++.+|++|+||++++||++|++||||++|++.++.++.                         
T Consensus         1 ~D~iad~lt~IrNa~~a~~~~v~ip~Skl~~~il~iL~~eGyI~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   80 (165)
T c3rf2A_           1 VDPIADMFSAIKNAIMRRDDFLYVPSSKLKERILDVLKKEGFIQDWEALKGEKYEEEYKKMKELAEKSPNPKMKRYLKQL   80 (165)
T ss_dssp             CCHHHHHHHHHHHHHHTTCSEEEEECCHHHHHHHHHHHHHTSEEEEEECCHHHHHHHHHHHHHHHHSSCCSSSHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             97289999673768754784699842227899999999849725369803677664211112233456555654433433


Q ss_pred             ----------EEEEEECC---CCCCCEECCEECCCCCEEEEECHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCEEE
Q ss_conf             ----------99998514---89964011203148880566168898987369869999888982366899963997089
Q batch____        59 ----------LELTLKYF---QGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEI  125 (130)
Q Consensus        59 ----------i~v~Lky~---~~~~~I~~i~~vSkpg~r~y~~~~~L~~~~~g~Gi~IlSTskGimt~~eA~~~~iGGei  125 (130)
                                +||.|||.   +++|+|+++++|||||+|+|+++++||++.+|+|++|||||+|||||+||+++++|||+
T Consensus        81 ~~~~~~~~~~l~i~LKY~~~~~~~pvI~~i~rVSkPg~RiY~~~~~l~~v~~G~Gi~IlSTskGImt~~EAr~~~iGGev  160 (165)
T c3rf2A_          81 EEYNKGTQYPIKIYLKYLDPKKRKSAITNIVKVSKGGRRVYAGVRTMPYVKRGLGIAIVSTDAGVMTDHEARRMRKGGEV  160 (165)
T ss_dssp             HHTTSTTCCEEEEEECBSSTTSCSBSCSCEEECSCSSSCCEECSTTCCCSGGGTSEEEEEETTEEEEHHHHHHTTCCEEE
T ss_pred             CCCCCCCCCEEEEEEEECCCCCCCCHHHCCEECCCCCCEEECCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCCEE
T ss_conf             33334555315899984278777814432155348871576088896887459609999788980466899964998289


Q ss_pred             EEEE
Q ss_conf             9998
Q batch____       126 ICYV  129 (130)
Q Consensus       126 L~~v  129 (130)
                      ||+|
T Consensus       161 Lc~V  164 (165)
T c3rf2A_         161 IAFV  164 (165)
T ss_dssp             EEEE
T ss_pred             EEEE
T ss_conf             9998