Email l.a.kelley@imperial.ac.uk Description P76150 Date Thu Jan 5 12:19:45 GMT 2012 Unique Job ID 2e4844b2fb1c37a6

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2izpB_ 20.1 29 PDB header:toxin Chain: B: PDB Molecule:putative membrane antigen; PDBTitle: bipd - an invasion prtein associated with the type-iii2 secretion system of burkholderia pseudomallei. 2 d2izpa1 17.2 29 Fold:IpaD-like Superfamily:IpaD-like Family:IpaD-like 3 c3hc7A_ 16.6 20 PDB header:cell adhesion Chain: A: PDB Molecule:gene 12 protein; PDBTitle: crystal structure of lysin b from mycobacteriophage d29 4 d1oh4a_ 14.8 28 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Family 27 carbohydrate binding module, CBM27 5 c1msvB_ 13.5 19 PDB header:lyase Chain: B: PDB Molecule:s-adenosylmethionine decarboxylase proenzyme; PDBTitle: the s68a s-adenosylmethionine decarboxylase proenzyme2 processing mutant. 6 c3ep3A_ 12.9 19 PDB header:lyase Chain: A: PDB Molecule:s-adenosylmethionine decarboxylase alpha chain; PDBTitle: human adometdc d174n mutant with no putrescine bound 7 d1upka_ 10.8 18 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:Mo25 protein 8 d1jl0a_ 10.8 19 Fold:S-adenosylmethionine decarboxylase Superfamily:S-adenosylmethionine decarboxylase Family:S-adenosylmethionine decarboxylase 9 d1phpa_ 10.7 21 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 10 c3q2tC_ 9.5 32 PDB header:rna binding protein/rna Chain: C: PDB Molecule:cleavage and polyadenylation specificity factor subunit 6; PDBTitle: crystal structure of cfim68 rrm/cfim25/rna complex 11 c2hh9A_ 9.3 26 PDB header:transferase Chain: A: PDB Molecule:thiamin pyrophosphokinase; PDBTitle: thiamin pyrophosphokinase from candida albicans 12 d1ejia_ 9.2 38 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 13 d1pmhx_ 8.6 26 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Family 27 carbohydrate binding module, CBM27 14 c2k6rA_ 8.3 75 PDB header:de novo protein Chain: A: PDB Molecule:full sequence design 1 synthetic superstable; PDBTitle: protein folding on a highly rugged landscape: experimental2 observation of glassy dynamics and structural frustration 15 c2hjqA_ 8.2 47 PDB header:structural genomics Chain: A: PDB Molecule:hypothetical protein yqbf; PDBTitle: nmr structure of bacillus subtilis protein yqbf, northeast2 structural genomics target sr449 16 c1fmeA_ 8.1 75 PDB header:de novo protein Chain: A: PDB Molecule:fsd-ey peptide; PDBTitle: solution structure of fsd-ey, a novel peptide assuming a2 beta-beta-alpha fold 17 c1fsvA_ 7.9 75 PDB header:beta beta alpha motif Chain: A: PDB Molecule:full sequence design 1 of beta beta alpha motif; PDBTitle: full sequence design 1 (fsd-1) of beta beta alpha motif,2 nmr, minimized average structure 18 c1fsdA_ 7.9 75 PDB header:novel sequence Chain: A: PDB Molecule:full sequence design 1 of beta beta alpha motif; PDBTitle: full sequence design 1 (fsd-1) of beta beta alpha motif,2 nmr, 41 structures 19 c3da7G_ 7.8 41 PDB header:protein binding Chain: G: PDB Molecule:barnase circular permutant; PDBTitle: a conformationally strained, circular permutant of barnase 20 c2l5gB_ 7.6 50 PDB header:transcription regulator Chain: B: PDB Molecule:putative uncharacterized protein ncor2; PDBTitle: co-ordinates and 1h, 13c and 15n chemical shift assignments for the2 complex of gps2 53-90 and smrt 167-207 21 c2hvzA_ not modelled 7.6 24 PDB header:rna binding protein Chain: A: PDB Molecule:splicing factor, arginine/serine-rich 7; PDBTitle: solution structure of the rrm domain of sr rich factor 9g8 22 c1zmrA_ not modelled 7.3 19 PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate kinase; PDBTitle: crystal structure of the e. coli phosphoglycerate kinase 23 c3cvzA_ not modelled 7.3 25 PDB header:structural protein Chain: A: PDB Molecule:s-layer protein; PDBTitle: structural insights into the molecular organization of the2 s-layer from clostridium difficile 24 c2rhqA_ not modelled 7.1 21 PDB header:ligase Chain: A: PDB Molecule:phenylalanyl-trna synthetase alpha chain; PDBTitle: phers from staphylococcus haemolyticus- rational protein2 engineering and inhibitor studies 25 d2arha1 not modelled 7.0 35 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:Aq 1966-like 26 d1fiua_ not modelled 7.0 54 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Restriction endonuclease NgoIV 27 d2hjqa2 not modelled 6.9 27 Fold:GINS/PriA/YqbF domain Superfamily:PriA/YqbF domain Family:YqbF N-terminal domain-like 28 d1z1za1 not modelled 6.7 25 Fold:Phage tail protein-like Superfamily:Phage tail protein-like Family:Lambda phage gpU-like 29 d1pgsa1 not modelled 6.6 53 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:PHM/PNGase F Family:Glycosyl-asparaginase 30 c2o8kA_ not modelled 6.6 47 PDB header:transcription/dna Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: nmr structure of the sigma-54 rpon domain bound to the-242 promoter element 31 c2ytuA_ not modelled 6.6 38 PDB header:signaling protein Chain: A: PDB Molecule:friend leukemia integration 1 transcription PDBTitle: solution structure of the sam_pnt-domain of the human2 friend leukemiaintegration 1 transcription factor 32 c3hlzA_ not modelled 6.6 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bt_1490; PDBTitle: crystal structure of bt_1490 (np_810393.1) from bacteroides2 thetaiotaomicron vpi-5482 at 1.50 a resolution 33 d1hd0a_ not modelled 6.5 28 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 34 c1v0sA_ not modelled 6.3 31 PDB header:hydrolase Chain: A: PDB Molecule:phospholipase d; PDBTitle: uninhibited form of phospholipase d from streptomyces sp.2 strain pmf 35 d1z3xa1 not modelled 6.2 25 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:GUN4-associated domain 36 d1mn4a_ not modelled 6.2 23 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:p53-like transcription factors Family:DNA-binding domain from NDT80 37 d1k3ea_ not modelled 6.2 16 Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Type III secretory system chaperone 38 c2c4bB_ not modelled 6.2 41 PDB header:fusion protein Chain: B: PDB Molecule:barnase mcoeeti fusion; PDBTitle: inhibitor cystine knot protein mcoeeti fused to the2 catalytically inactive barnase mutant h102a 39 d2bida_ not modelled 5.9 21 Fold:Toxins' membrane translocation domains Superfamily:Bcl-2 inhibitors of programmed cell death Family:Bcl-2 inhibitors of programmed cell death 40 c2e5iA_ not modelled 5.8 24 PDB header:gene regulation Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l-like; PDBTitle: solution structure of rna binding domain 2 in heterogeneous2 nuclear ribonucleoprotein l-like 41 c2dkxA_ not modelled 5.7 38 PDB header:signaling protein Chain: A: PDB Molecule:sam pointed domain-containing ets transcription PDBTitle: solution structure of the sam_pnt-domain of ets2 transcription factor pdef (prostate ets) 42 d1jyoa_ not modelled 5.4 13 Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Type III secretory system chaperone 43 c3md1B_ not modelled 5.4 35 PDB header:rna binding protein Chain: B: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein PDBTitle: crystal structure of the second rrm domain of yeast poly(u)-binding2 protein (pub1) 44 d1x9ba_ not modelled 5.4 44 Fold:Protozoan pheromone-like Superfamily:Hypothetical membrane protein Ta0354, soluble domain Family:Hypothetical membrane protein Ta0354, soluble domain 45 c3lgbB_ not modelled 5.4 36 PDB header:transferase Chain: B: PDB Molecule:dna primase large subunit; PDBTitle: crystal structure of the fe-s domain of the yeast dna primase 46 c3if8A_ not modelled 5.2 20 PDB header:cell cycle Chain: A: PDB Molecule:protein zwilch homolog; PDBTitle: crystal structure of zwilch, a member of the rzz kinetochore complex 47 d1erpa_ not modelled 5.0 47 Fold:Protozoan pheromone-like Superfamily:Protozoan pheromone proteins Family:Protozoan pheromone proteins