PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3hc7A_

Fold library id	PDB Header	Molecule	Title
c3hc7A_	PDB header: cell adhesion	Chain: A: PDB Molecule: gene 12 protein;	PDBTitle: crystal structure of lysin b from mycobacteriophage d29

Links to external resources
Added to library: Sun Aug 29 00:12:14 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S K P W L F T V H G T G Q P D P L G P G L P A D T A R D V L D I Y R W Q P I G N Y P A A A F P M W P S V E K G V A E L I L Q I E L K L D A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S S S T T S T T T S
S
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P Y A D F A M A G Y S Q G A I V V G Q V L K H H I L P P T G R L H R F L H R L K K V I F W G N P M R Q K G F A H S D E W I H P V A A P D T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S S T T
T T G G G G G G S
T T
T T
B
S S S S
B
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G I L E D R L E N L E Q Y G F E V R D Y A H D G D M Y A S I K E D D L H E Y E V A I G R I V M K A S G F I G G R D S V V A Q L I E L G Q R P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
G G G S S S
B T T
G G G
G G G T T
S
S S S S T T S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . .

Sequence I T E G I A L A G A I I D A L T F F A R S R M G D K W P H L Y N R Y P A V E F L R Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	K	P	W	L	F	T	V	H	G	T	G	Q	P	D	P	L	G	P	G	L	P	A	D	T	A	R	D	V	L	D	I	Y	R	W	Q	P	I	G	N	Y	P	A	A	A	F	P	M	W	P	S	V	E	K	G	V	A	E	L	I	L	Q	I	E	L	K	L	D	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T				T	T	S	S	S							T	T	S	T	T	T	S							S					S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	Y	A	D	F	A	M	A	G	Y	S	Q	G	A	I	V	V	G	Q	V	L	K	H	H	I	L	P	P	T	G	R	L	H	R	F	L	H	R	L	K	K	V	I	F	W	G	N	P	M	R	Q	K	G	F	A	H	S	D	E	W	I	H	P	V	A	A	P	D	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T									T														T	S	S	T	T		T	T	G	G	G	G	G	G								S		T	T			T	T			B			S	S	S	S		B			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	I	L	E	D	R	L	E	N	L	E	Q	Y	G	F	E	V	R	D	Y	A	H	D	G	D	M	Y	A	S	I	K	E	D	D	L	H	E	Y	E	V	A	I	G	R	I	V	M	K	A	S	G	F	I	G	G	R	D	S	V	V	A	Q	L	I	E	L	G	Q	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S	S					G	G	G	S	S	S							B	T	T		G	G	G				G	G	G	T	T														S		S	S	S	S	T	T	S										S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Sequence	I	T	E	G	I	A	L	A	G	A	I	I	D	A	L	T	F	F	A	R	S	R	M	G	D	K	W	P	H	L	Y	N	R	Y	P	A	V	E	F	L	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S					S			T	T												T