Email l.a.kelley@imperial.ac.uk Description P0ADL6 Date Thu Jan 5 11:21:18 GMT 2012 Unique Job ID 2e35e9fc47d711be

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3chxG_ 59.5 30 PDB header:membrane protein Chain: G: PDB Molecule:pmoc; PDBTitle: crystal structure of methylosinus trichosporium ob3b2 particulate methane monooxygenase (pmmo) 2 d1prtf_ 51.7 59 Fold:OB-fold Superfamily:Bacterial enterotoxins Family:Bacterial AB5 toxins, B-subunits 3 c1yewC_ 44.7 30 PDB header:oxidoreductase, membrane protein Chain: C: PDB Molecule:particulate methane monooxygenase subunit c2; PDBTitle: crystal structure of particulate methane monooxygenase 4 d1pjwa_ 25.8 67 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Class II viral fusion proteins C-terminal domain 5 d1s6na_ 24.6 56 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Class II viral fusion proteins C-terminal domain 6 c3egpA_ 24.6 33 PDB header:viral protein Chain: A: PDB Molecule:envelope protein; PDBTitle: crystal structure analysis of dengue-1 envelope protein2 domain iii 7 c3lbwB_ 24.3 38 PDB header:transport protein Chain: B: PDB Molecule:m2 protein; PDBTitle: high resolution crystal structure of transmembrane domain of m2 8 c3lbwD_ 24.3 38 PDB header:transport protein Chain: D: PDB Molecule:m2 protein; PDBTitle: high resolution crystal structure of transmembrane domain of m2 9 c3lbwC_ 24.3 38 PDB header:transport protein Chain: C: PDB Molecule:m2 protein; PDBTitle: high resolution crystal structure of transmembrane domain of m2 10 c3lbwA_ 24.3 38 PDB header:transport protein Chain: A: PDB Molecule:m2 protein; PDBTitle: high resolution crystal structure of transmembrane domain of m2 11 d1v32a_ 19.4 23 Fold:SWIB/MDM2 domain Superfamily:SWIB/MDM2 domain Family:SWIB/MDM2 domain 12 c2jqmA_ 18.2 33 PDB header:transferase Chain: A: PDB Molecule:envelope protein e; PDBTitle: yellow fever envelope protein domain iii nmr structure2 (s288-k398) 13 c3c9jC_ 18.2 38 PDB header:membrane protein Chain: C: PDB Molecule:proton channel protein m2, transmembrane segment; PDBTitle: the crystal structure of transmembrane domain of m2 protein and2 amantadine complex 14 c3c9jB_ 18.2 38 PDB header:membrane protein Chain: B: PDB Molecule:proton channel protein m2, transmembrane segment; PDBTitle: the crystal structure of transmembrane domain of m2 protein and2 amantadine complex 15 c3c9jA_ 18.2 38 PDB header:membrane protein Chain: A: PDB Molecule:proton channel protein m2, transmembrane segment; PDBTitle: the crystal structure of transmembrane domain of m2 protein and2 amantadine complex 16 c3c9jD_ 18.2 38 PDB header:membrane protein Chain: D: PDB Molecule:proton channel protein m2, transmembrane segment; PDBTitle: the crystal structure of transmembrane domain of m2 protein and2 amantadine complex 17 d1v31a_ 17.6 26 Fold:SWIB/MDM2 domain Superfamily:SWIB/MDM2 domain Family:SWIB/MDM2 domain 18 d1ixra1 14.6 43 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:DNA helicase RuvA subunit, middle domain 19 c2h0pA_ 14.0 22 PDB header:viral protein Chain: A: PDB Molecule:envelope glycoprotein; PDBTitle: nmr structure of the dengue-4 virus envelope protein domain2 iii 20 d1uhra_ 12.6 27 Fold:SWIB/MDM2 domain Superfamily:SWIB/MDM2 domain Family:SWIB/MDM2 domain 21 c2kncA_ not modelled 12.1 31 PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 22 d2iuba2 not modelled 11.9 17 Fold:Transmembrane helix hairpin Superfamily:Magnesium transport protein CorA, transmembrane region Family:Magnesium transport protein CorA, transmembrane region 23 c2wwbC_ not modelled 11.9 36 PDB header:ribosome Chain: C: PDB Molecule:protein transport protein sec61 subunit beta; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome 24 c1nyjB_ not modelled 9.6 33 PDB header:viral protein Chain: B: PDB Molecule:matrix protein m2; PDBTitle: the closed state structure of m2 protein h+ channel by2 solid state nmr spectroscopy 25 c2kqtC_ not modelled 9.6 33 PDB header:transport protein Chain: C: PDB Molecule:m2 protein; PDBTitle: solid-state nmr structure of the m2 transmembrane peptide of the2 influenza a virus in dmpc lipid bilayers bound to deuterated3 amantadine 26 c2kqtA_ not modelled 9.6 33 PDB header:transport protein Chain: A: PDB Molecule:m2 protein; PDBTitle: solid-state nmr structure of the m2 transmembrane peptide of the2 influenza a virus in dmpc lipid bilayers bound to deuterated3 amantadine 27 c1nyjA_ not modelled 9.6 33 PDB header:viral protein Chain: A: PDB Molecule:matrix protein m2; PDBTitle: the closed state structure of m2 protein h+ channel by2 solid state nmr spectroscopy 28 c1nyjD_ not modelled 9.6 33 PDB header:viral protein Chain: D: PDB Molecule:matrix protein m2; PDBTitle: the closed state structure of m2 protein h+ channel by2 solid state nmr spectroscopy 29 c2kqtB_ not modelled 9.6 33 PDB header:transport protein Chain: B: PDB Molecule:m2 protein; PDBTitle: solid-state nmr structure of the m2 transmembrane peptide of the2 influenza a virus in dmpc lipid bilayers bound to deuterated3 amantadine 30 c1nyjC_ not modelled 9.6 33 PDB header:viral protein Chain: C: PDB Molecule:matrix protein m2; PDBTitle: the closed state structure of m2 protein h+ channel by2 solid state nmr spectroscopy 31 c1mp6A_ not modelled 9.6 33 PDB header:membrane protein Chain: A: PDB Molecule:matrix protein m2; PDBTitle: structure of the transmembrane region of the m2 protein h+2 channel by solid state nmr spectroscopy 32 c2kqtD_ not modelled 9.6 33 PDB header:transport protein Chain: D: PDB Molecule:m2 protein; PDBTitle: solid-state nmr structure of the m2 transmembrane peptide of the2 influenza a virus in dmpc lipid bilayers bound to deuterated3 amantadine 33 c2bbjB_ not modelled 9.0 14 PDB header:metal transport/membrane protein Chain: B: PDB Molecule:divalent cation transport-related protein; PDBTitle: crystal structure of the cora mg2+ transporter 34 d2fp7b1 not modelled 8.3 55 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 35 c3bkdE_ not modelled 8.1 33 PDB header:viral protein, membrane protein Chain: E: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 36 c3bkdG_ not modelled 8.1 33 PDB header:viral protein, membrane protein Chain: G: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 37 c3bkdH_ not modelled 8.1 33 PDB header:viral protein, membrane protein Chain: H: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 38 c3bkdD_ not modelled 8.1 33 PDB header:viral protein, membrane protein Chain: D: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 39 c3bkdC_ not modelled 8.1 33 PDB header:viral protein, membrane protein Chain: C: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 40 c3bkdA_ not modelled 8.1 33 PDB header:viral protein, membrane protein Chain: A: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 41 c3bkdF_ not modelled 8.1 33 PDB header:viral protein, membrane protein Chain: F: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 42 c3bkdB_ not modelled 8.1 33 PDB header:viral protein, membrane protein Chain: B: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 43 c3c6dB_ not modelled 7.1 33 PDB header:virus Chain: B: PDB Molecule:polyprotein; PDBTitle: the pseudo-atomic structure of dengue immature virus 44 c2ehoL_ not modelled 6.8 16 PDB header:replication Chain: L: PDB Molecule:gins complex subunit 3; PDBTitle: crystal structure of human gins complex 45 c3i9yA_ not modelled 6.7 13 PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the v. parahaemolyticus histidine2 kinase sensor tors sensor domain 46 d1ok8a1 not modelled 6.5 38 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Class II viral fusion proteins C-terminal domain 47 d2fomb1 not modelled 6.2 55 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 48 c3e90B_ not modelled 6.2 55 PDB header:hydrolase Chain: B: PDB Molecule:ns3 protease; PDBTitle: west nile vi rus ns2b-ns3protease in complexed with2 inhibitor naph-kkr-h 49 c2rlfA_ not modelled 6.2 33 PDB header:proton transport Chain: A: PDB Molecule:matrix protein 2; PDBTitle: proton channel m2 from influenza a in complex with2 inhibitor rimantadine 50 d2ijob1 not modelled 6.2 55 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 51 c3uajA_ not modelled 5.8 22 PDB header:viral protein/immune system Chain: A: PDB Molecule:envelope protein; PDBTitle: crystal structure of the envelope glycoprotein ectodomain from dengue2 virus serotype 4 in complex with the fab fragment of the chimpanzee3 monoclonal antibody 5h2 52 c2w8xB_ not modelled 5.7 40 PDB header:membrane protein Chain: B: PDB Molecule:ion-channel modulator raklp; PDBTitle: structure of the tick ion-channel modulator ra-klp 53 c1urzC_ not modelled 5.6 44 PDB header:virus/viral protein Chain: C: PDB Molecule:envelope protein; PDBTitle: low ph induced, membrane fusion conformation of the2 envelope protein of tick-borne encephalitis virus 54 d2f2ab1 not modelled 5.5 39 Fold:GatB/YqeY motif Superfamily:GatB/YqeY motif Family:GatB/GatE C-terminal domain-like 55 d1befa_ not modelled 5.4 55 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 56 c3lkwA_ not modelled 5.4 55 PDB header:viral protein,hydrolase Chain: A: PDB Molecule:fusion protein of nonstructural protein 2b and PDBTitle: crystal structure of dengue virus 1 ns2b/ns3 protease active2 site mutant 57 d1ztxe1 not modelled 5.3 50 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Class II viral fusion proteins C-terminal domain 58 c2kadD_ not modelled 5.3 29 PDB header:membrane protein Chain: D: PDB Molecule:transmembrane peptide of matrix protein 2; PDBTitle: magic-angle-spinning solid-state nmr structure of influenza2 a m2 transmembrane domain 59 c2kadA_ not modelled 5.3 29 PDB header:membrane protein Chain: A: PDB Molecule:transmembrane peptide of matrix protein 2; PDBTitle: magic-angle-spinning solid-state nmr structure of influenza2 a m2 transmembrane domain 60 c2kadC_ not modelled 5.3 29 PDB header:membrane protein Chain: C: PDB Molecule:transmembrane peptide of matrix protein 2; PDBTitle: magic-angle-spinning solid-state nmr structure of influenza2 a m2 transmembrane domain 61 c2kadB_ not modelled 5.3 29 PDB header:membrane protein Chain: B: PDB Molecule:transmembrane peptide of matrix protein 2; PDBTitle: magic-angle-spinning solid-state nmr structure of influenza2 a m2 transmembrane domain