PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3i9yA_

Fold library id	PDB Header	Molecule	Title
c3i9yA_	PDB header: transferase	Chain: A: PDB Molecule: sensor protein;	PDBTitle: crystal structure of the v. parahaemolyticus histidine2 kinase sensor tors sensor domain

Links to external resources
Added to library: Sun Aug 29 01:34:49 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S A M I E A R Q V S E L S T R I I S S V Q M L S N A Q N E Q E R K E A G R V L F E Q L E S L L T H I K E L G G E S F D S K L L D A L E S N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q N V I N N L A E L G V T V E R K L W L A K E I D T R V E E M R L L S E E L E Q L T R T L D L T E R L H E L H L L A F K M L N Q I E E A R T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L T N V D R I Q Q I Q T A F E N N L K I M K R R V L A V E D P T R S K Q M S Q L L T E L G K R Q V V F T I L L Q Q Y E N N E Q S Q Q L M Q K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S G G G

. . . . . . . . . 220 . . . . . . . . .

Sequence T L E L F S E L N S T V N K L V D D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	A	M	I	E	A	R	Q	V	S	E	L	S	T	R	I	I	S	S	V	Q	M	L	S	N	A	Q	N	E	Q	E	R	K	E	A	G	R	V	L	F	E	Q	L	E	S	L	L	T	H	I	K	E	L	G	G	E	S	F	D	S	K	L	L	D	A	L	E	S	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T			S																												T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	N	V	I	N	N	L	A	E	L	G	V	T	V	E	R	K	L	W	L	A	K	E	I	D	T	R	V	E	E	M	R	L	L	S	E	E	L	E	Q	L	T	R	T	L	D	L	T	E	R	L	H	E	L	H	L	L	A	F	K	M	L	N	Q	I	E	E	A	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																										T																											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	T	N	V	D	R	I	Q	Q	I	Q	T	A	F	E	N	N	L	K	I	M	K	R	R	V	L	A	V	E	D	P	T	R	S	K	Q	M	S	Q	L	L	T	E	L	G	K	R	Q	V	V	F	T	I	L	L	Q	Q	Y	E	N	N	E	Q	S	Q	Q	L	M	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																											T			S																	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Sequence	T	L	E	L	F	S	E	L	N	S	T	V	N	K	L	V	D	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T