Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	P	L	S	P	Y	L	S	F	A	G	N	C	S	D	A	I	A	Y	Y	Q	R	T	L	G	A	E	L	L	Y	K	I	S	F	G	E	M	P	K	S	A	Q	D	S	A	E	N	C	P	S	G	M	Q	F	P	D	T	A	I	A
Secondary structure
SS confidence
Disorder		?	?	?																																			?	?	?	?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		H	A	N	V	R	I	A	G	S	D	I	M	M	S	D	A	M	P	S	G	K	A	S	Y	S	G	F	T	L	V	L	D	S	Q	Q	V	E	E	G	K	R	W	F	D	N	L	A	A	N	G	K	I	E	M	A	W	Q	E	T	F
Secondary structure
SS confidence
Disorder																			?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Sequence		W	A	H	G	F	G	K	V	T	D	K	F	G	V	P	W	M	I	N	V	V	K	Q	Q	P	T	Q
Secondary structure
SS confidence
Disorder																						?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1u6l chain A Region: 1 - 143 Aligned: 131 Modelled: 143 Confidence: 100.0% Identity: 33% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: 3-demethylubiquinone-9 3-methyltransferase Phyre2 PDB 3oms chain A Region: 2 - 141 Aligned: 126 Modelled: 121 Confidence: 100.0% Identity: 21% PDB header:transferase Chain: A: PDB Molecule:phnb protein; PDBTitle: putative 3-demethylubiquinone-9 3-methyltransferase, phnb protein,2 from bacillus cereus. Phyre2 PDB 1u7i chain A Region: 2 - 141 Aligned: 127 Modelled: 140 Confidence: 100.0% Identity: 20% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: 3-demethylubiquinone-9 3-methyltransferase Phyre2 PDB 1tsj chain A Region: 2 - 142 Aligned: 112 Modelled: 122 Confidence: 100.0% Identity: 24% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: 3-demethylubiquinone-9 3-methyltransferase Phyre2 PDB 3l20 chain A Region: 1 - 147 Aligned: 140 Modelled: 141 Confidence: 100.0% Identity: 26% PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a hypothetical protein from staphylococcus aureus Phyre2 PDB 1u69 chain A Region: 2 - 138 Aligned: 115 Modelled: 125 Confidence: 100.0% Identity: 19% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: 3-demethylubiquinone-9 3-methyltransferase Phyre2 PDB 1xy7 chain A Region: 2 - 139 Aligned: 108 Modelled: 110 Confidence: 99.9% Identity: 30% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: Hypothetical protein At5g48480 Phyre2 PDB 2q48 chain A Region: 2 - 139 Aligned: 108 Modelled: 110 Confidence: 99.9% Identity: 30% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein at5g48480; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at5g48480 Phyre2 PDB 2zw7 chain A Region: 2 - 142 Aligned: 117 Modelled: 120 Confidence: 99.7% Identity: 14% PDB header:transferase Chain: A: PDB Molecule:bleomycin acetyltransferase; PDBTitle: crystal structure of bleomycin n-acetyltransferase complexed2 with bleomycin a2 and coenzyme a Phyre2 PDB 3itw chain A Region: 2 - 141 Aligned: 118 Modelled: 118 Confidence: 99.7% Identity: 19% PDB header:peptide binding protein Chain: A: PDB Molecule:protein tiox; PDBTitle: crystal structure of tiox from micromonospora sp. ml1 Phyre2 PDB 3fcd chain B Region: 2 - 147 Aligned: 112 Modelled: 120 Confidence: 99.5% Identity: 17% PDB header:lyase Chain: B: PDB Molecule:lyase; PDBTitle: crystal structure of a putative glyoxalase from an2 environmental bacteria Phyre2 PDB 3r6a chain B Region: 1 - 138 Aligned: 109 Modelled: 114 Confidence: 99.4% Identity: 11% PDB header:isomerase, lyase Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein (hypothetical protein2 mm_3218) from methanosarcina mazei. Phyre2 PDB 2rk9 chain B Region: 1 - 141 Aligned: 110 Modelled: 117 Confidence: 99.4% Identity: 15% PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxalase/bleomycin resistance protein/dioxygenase; PDBTitle: the crystal structure of a glyoxalase/bleomycin resistance2 protein/dioxygenase superfamily member from vibrio splendidus 12b01 Phyre2 PDB 2pjs chain A domain 1 Region: 1 - 138 Aligned: 108 Modelled: 112 Confidence: 99.4% Identity: 15% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: Antibiotic resistance proteins Phyre2 PDB 3bt3 chain B Region: 4 - 138 Aligned: 111 Modelled: 115 Confidence: 99.3% Identity: 10% PDB header:structural genomics, unknown function Chain: B: PDB Molecule:glyoxalase-related enzyme, arac type; PDBTitle: crystal structure of a glyoxalase-related enzyme from clostridium2 phytofermentans Phyre2 PDB 2qnt chain A Region: 1 - 141 Aligned: 118 Modelled: 121 Confidence: 99.3% Identity: 13% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1872; PDBTitle: crystal structure of protein of unknown function from agrobacterium2 tumefaciens str. c58 Phyre2 PDB 2i7r chain A domain 1 Region: 7 - 138 Aligned: 102 Modelled: 106 Confidence: 99.3% Identity: 17% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: Antibiotic resistance proteins Phyre2 PDB 1ecs chain A Region: 2 - 138 Aligned: 108 Modelled: 111 Confidence: 99.2% Identity: 16% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: Antibiotic resistance proteins Phyre2 PDB 3m2o chain B Region: 2 - 139 Aligned: 113 Modelled: 120 Confidence: 99.2% Identity: 20% PDB header:structural genomics, unknown function Chain: B: PDB Molecule:glyoxalase/bleomycin resistance protein; PDBTitle: crystal structure of a putative glyoxalase/bleomycin resistance2 protein from rhodopseudomonas palustris cga009 Phyre2 PDB 1kll chain A Region: 2 - 141 Aligned: 115 Modelled: 115 Confidence: 99.2% Identity: 12% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: Antibiotic resistance proteins Phyre2 1 d1u6la_ 2 c3omsA_ 3 d1u7ia_ 4 d1tsja_ 5 c3l20A_ 6 d1u69a_ 7 d1xy7a_ 8 c2q48A_ 9 c2zw7A_ 10 c3itwA_ 11 c3fcdB_ 12 c3r6aB_ 13 c2rk9B_ 14 d2pjsa1 15 c3bt3B_ 16 c2qntA_ 17 d2i7ra1 18 d1ecsa_ 19 c3m2oB_ 20 d1klla_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1u6la_ 100.0 33 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:3-demethylubiquinone-9 3-methyltransferase 2 c3omsA_ 100.0 21 PDB header:transferase Chain: A: PDB Molecule:phnb protein; PDBTitle: putative 3-demethylubiquinone-9 3-methyltransferase, phnb protein,2 from bacillus cereus. 3 d1u7ia_ 100.0 20 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:3-demethylubiquinone-9 3-methyltransferase 4 d1tsja_ 100.0 24 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:3-demethylubiquinone-9 3-methyltransferase 5 c3l20A_ 100.0 26 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a hypothetical protein from staphylococcus aureus 6 d1u69a_ 100.0 19 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:3-demethylubiquinone-9 3-methyltransferase 7 d1xy7a_ 99.9 30 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Hypothetical protein At5g48480 8 c2q48A_ 99.9 30 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein at5g48480; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at5g48480 9 c2zw7A_ 99.7 14 PDB header:transferase Chain: A: PDB Molecule:bleomycin acetyltransferase; PDBTitle: crystal structure of bleomycin n-acetyltransferase complexed2 with bleomycin a2 and coenzyme a 10 c3itwA_ 99.7 19 PDB header:peptide binding protein Chain: A: PDB Molecule:protein tiox; PDBTitle: crystal structure of tiox from micromonospora sp. ml1 11 c3fcdB_ 99.5 17 PDB header:lyase Chain: B: PDB Molecule:lyase; PDBTitle: crystal structure of a putative glyoxalase from an2 environmental bacteria 12 c3r6aB_ 99.4 11 PDB header:isomerase, lyase Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein (hypothetical protein2 mm_3218) from methanosarcina mazei. 13 c2rk9B_ 99.4 15 PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxalase/bleomycin resistance protein/dioxygenase; PDBTitle: the crystal structure of a glyoxalase/bleomycin resistance2 protein/dioxygenase superfamily member from vibrio splendidus 12b01 14 d2pjsa1 99.4 15 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 15 c3bt3B_ 99.3 10 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:glyoxalase-related enzyme, arac type; PDBTitle: crystal structure of a glyoxalase-related enzyme from clostridium2 phytofermentans 16 c2qntA_ 99.3 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1872; PDBTitle: crystal structure of protein of unknown function from agrobacterium2 tumefaciens str. c58 17 d2i7ra1 99.3 17 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 18 d1ecsa_ 99.2 16 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 19 c3m2oB_ 99.2 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:glyoxalase/bleomycin resistance protein; PDBTitle: crystal structure of a putative glyoxalase/bleomycin resistance2 protein from rhodopseudomonas palustris cga009 20 d1klla_ 99.2 12 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 21 c3rheA_ not modelled 99.2 13 PDB header:oxidoreductase Chain: A: PDB Molecule:nad-dependent benzaldehyde dehydrogenase; PDBTitle: the crystal structure of nad-dependent benzaldehyde dehydrogenase from2 legionella pneumophila 22 c2rbbB_ not modelled 99.2 19 PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxalase/bleomycin resistance protein/dioxygenase; PDBTitle: crystal structure of a glyoxalase/bleomycin resistance2 protein/dioxygenase family enzyme from burkholderia phytofirmans psjn 23 c3bqxA_ not modelled 99.2 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:glyoxalase-related enzyme; PDBTitle: high resolution crystal structure of a glyoxalase-related enzyme from2 fulvimarina pelagi 24 c3g12A_ not modelled 99.2 13 PDB header:lyase Chain: A: PDB Molecule:putative lactoylglutathione lyase; PDBTitle: crystal structure of a putative lactoylglutathione lyase2 from bdellovibrio bacteriovorus 25 c2kjzA_ not modelled 99.1 15 PDB header:unknown function Chain: A: PDB Molecule:atc0852; PDBTitle: solution nmr structure of protein atc0852 from agrobacterium2 tumefaciens. northeast structural genomics consortium (nesg) target3 att2. 26 d1twua_ not modelled 99.1 14 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Hypothetical protein YycE 27 c2r6uB_ not modelled 99.1 12 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of gene product rha04853 from rhodococcus sp. rha1 28 c3r4qB_ not modelled 99.1 14 PDB header:lyase Chain: B: PDB Molecule:lactoylglutathione lyase; PDBTitle: crystal structure of lactoylglutathione lyase from agrobacterium2 tumefaciens 29 d1mpya2 not modelled 99.0 9 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 30 d1lgta2 not modelled 99.0 16 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 31 d1jifa_ not modelled 99.0 17 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 32 c3sk1C_ not modelled 99.0 8 PDB header:griseoluteate-binding protein Chain: C: PDB Molecule:ehpr; PDBTitle: crystal structure of phenazine resistance protein ehpr from2 enterobacter agglomerans (erwinia herbicola, pantoea agglomerans)3 eh1087, apo form 33 d1f9za_ not modelled 99.0 19 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Glyoxalase I (lactoylglutathione lyase) 34 d1xrka_ not modelled 98.9 15 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 35 c3e5dA_ not modelled 98.9 14 PDB header:lyase Chain: A: PDB Molecule:putative glyoxalase i; PDBTitle: crystal structure of a putative glyoxalase i (lmof2365_0426) from2 listeria monocytogenes str. 4b f2365 at 2.70 a resolution 36 c2rk0B_ not modelled 98.9 15 PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxalase/bleomycin resistance protein/dioxygenase domain; PDBTitle: crystal structure of glyoxylase/bleomycin resistance2 protein/dioxygenase domain from frankia sp. ean1pec 37 c3ghjA_ not modelled 98.9 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative integron gene cassette protein; PDBTitle: crystal structure from the mobile metagenome of halifax2 harbour sewage outfall: integron cassette protein hfx_cass4 38 d1xqaa_ not modelled 98.9 15 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 39 d1zswa1 not modelled 98.9 9 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:BC1024-like 40 c3l7tB_ not modelled 98.9 14 PDB header:metal binding protein Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of smu.1112c 41 c2p25A_ not modelled 98.8 18 PDB header:oxidoreductase Chain: A: PDB Molecule:glyoxalase family protein; PDBTitle: the crystal structure of the glyoxalase family protein from2 enterococcus faecalis 42 d1nkia_ not modelled 98.8 18 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 43 c3rriB_ not modelled 98.8 9 PDB header:metal binding protein Chain: B: PDB Molecule:glyoxalase/bleomycin resistance protein/dioxygenase; PDBTitle: crystal structure of glyoxalase/bleomycin resistance2 protein/dioxygenase from alicyclobacillus acidocaldarius 44 c3oa4A_ not modelled 98.8 16 PDB header:lyase Chain: A: PDB Molecule:glyoxalase; PDBTitle: crystal structure of hypothetical protein bh1468 from bacillus2 halodurans c-125 45 d1sp8a1 not modelled 98.8 21 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 46 d1qipa_ not modelled 98.8 13 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Glyoxalase I (lactoylglutathione lyase) 47 c2p7pB_ not modelled 98.8 17 PDB header:metal binding protein, hydrolase Chain: B: PDB Molecule:glyoxalase family protein; PDBTitle: crystal structure of genomically encoded fosfomycin resistance2 protein, fosx, from listeria monocytogenes complexed with mn(ii) and3 sulfate ion 48 d1zswa2 not modelled 98.8 12 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:BC1024-like 49 d1mpya1 not modelled 98.8 11 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 50 c3ey7B_ not modelled 98.7 14 PDB header:oxidoreductase Chain: B: PDB Molecule:biphenyl-2,3-diol 1,2-dioxygenase iii-related PDBTitle: structure from the mobile metagenome of v. cholerae.2 integron cassette protein vch_cass1 51 c1zswA_ not modelled 98.7 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:glyoxalase family protein; PDBTitle: crystal structure of bacillus cereus metallo protein from glyoxalase2 family 52 c3ct8A_ not modelled 98.7 12 PDB header:lyase Chain: A: PDB Molecule:putative glyoxalase; PDBTitle: crystal structure of a putative glyoxalase (np_243026.1) from bacillus2 halodurans at 2.10 a resolution 53 c3zw5A_ not modelled 98.7 14 PDB header:lyase Chain: A: PDB Molecule:glyoxalase domain-containing protein 5; PDBTitle: crystal structure of the human glyoxalase domain-containing2 protein 5 54 c3huhA_ not modelled 98.7 16 PDB header:viral protein Chain: A: PDB Molecule:virulence protein stm3117; PDBTitle: the structure of biphenyl-2,3-diol 1,2-dioxygenase iii-2 related protein from salmonella typhimurium 55 d2c21a1 not modelled 98.7 15 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Glyoxalase I (lactoylglutathione lyase) 56 c3rmuD_ not modelled 98.7 12 PDB header:isomerase Chain: D: PDB Molecule:methylmalonyl-coa epimerase, mitochondrial; PDBTitle: crystal structure of human methylmalonyl-coa epimerase, mcee 57 d1lgta1 not modelled 98.7 13 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 58 c3b59A_ not modelled 98.6 12 PDB header:lyase Chain: A: PDB Molecule:glyoxalase/bleomycin resistance protein/dioxygenase; PDBTitle: crystal structure of the mn(ii)-bound glyoxalase from novosphingobium2 aromaticivorans 59 d1npba_ not modelled 98.6 14 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 60 d1r9ca_ not modelled 98.6 9 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 61 c1mpyD_ not modelled 98.6 9 PDB header:oxidoreductase Chain: D: PDB Molecule:catechol 2,3-dioxygenase; PDBTitle: structure of catechol 2,3-dioxygenase (metapyrocatechase)2 from pseudomonas putida mt-2 62 d1f1ua1 not modelled 98.6 16 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 63 d1sqda1 not modelled 98.6 13 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 64 c2qqzB_ not modelled 98.6 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:glyoxalase family protein, putative; PDBTitle: crystal structure of putative glyoxalase family protein from bacillus2 anthracis 65 d1jc4a_ not modelled 98.6 12 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Methylmalonyl-CoA epimerase 66 d1t47a1 not modelled 98.6 15 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 67 d1sqia1 not modelled 98.6 12 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 68 d1kw3b1 not modelled 98.6 17 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 69 c2qh0A_ not modelled 98.6 7 PDB header:lyase Chain: A: PDB Molecule:lactoylglutathione lyase; PDBTitle: crystal structure of a glyoxalase from clostridium acetobutylicum 70 d1q0oa2 not modelled 98.6 11 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 71 d1f1xa1 not modelled 98.6 11 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 72 c1sp8A_ not modelled 98.6 17 PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxyphenylpyruvate dioxygenase; PDBTitle: 4-hydroxyphenylpyruvate dioxygenase 73 c3kolA_ not modelled 98.5 11 PDB header:metal binding protein Chain: A: PDB Molecule:glyoxalase/bleomycin resistance PDBTitle: crystal structure of a glyoxalase/dioxygenase from nostoc2 punctiforme 74 c3oajA_ not modelled 98.5 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative ring-cleaving dioxygenase mhqo; PDBTitle: crystal structure of putative dioxygenase from bacillus subtilis2 subsp. subtilis str. 168 75 d1kw3b2 not modelled 98.5 16 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 76 c3pkwA_ not modelled 98.5 19 PDB header:lyase Chain: A: PDB Molecule:toxoflavin lyase (tfla); PDBTitle: crystal structure of toxoflavin lyase (tfla) bound to mn(ii) 77 c3hpyD_ not modelled 98.5 11 PDB header:oxidoreductase Chain: D: PDB Molecule:catechol 2,3-dioxygenase; PDBTitle: crystal structure analysis of the 2,3-dioxygenase lapb from2 pseudomonas in the complex with 4-methylcatechol 78 c1f1uB_ not modelled 98.5 13 PDB header:oxidoreductase Chain: B: PDB Molecule:homoprotocatechuate 2,3-dioxygenase; PDBTitle: crystal structure of homoprotocatechuate 2,3-dioxygenase from2 arthrobacter globiformis (native, low temperature) 79 d1sp9a_ not modelled 98.5 15 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 80 d1ss4a_ not modelled 98.5 7 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Hypothetical protein BC1747 81 c3ecjC_ not modelled 98.5 11 PDB header:oxidoreductase Chain: C: PDB Molecule:protein (homoprotocatechuate 2,3-dioxygenase); PDBTitle: structure of e323l mutant of homoprotocatechuate 2,3-dioxygenase from2 brevibacterium fuscum at 1.65a resolution 82 c3lm4C_ not modelled 98.4 10 PDB header:oxidoreductase Chain: C: PDB Molecule:catechol 2,3-dioxygenase; PDBTitle: crystal structure of 2,3-dihydroxy biphenyl dioxygenase from2 rhodococcus sp. (strain rha1) 83 c1knfA_ not modelled 98.4 16 PDB header:oxidoreductase Chain: A: PDB Molecule:2,3-dihydroxybiphenyl 1,2-dioxygenase; PDBTitle: crystal structure of 2,3-dihydroxybiphenyl 1,2-dioxygenase complexed2 with 3-methyl catechol under anaerobic condition 84 c1kw3B_ not modelled 98.4 18 PDB header:oxidoreductase Chain: B: PDB Molecule:2,3-dihydroxybiphenyl dioxygenase; PDBTitle: crystal structure of 2,3-dihydroxybiphenyal dioxygenase (bphc) at 1.452 a resolution 85 c1sqiA_ not modelled 98.4 12 PDB header:biosynthetic protein Chain: A: PDB Molecule:4-hydroxyphenylpyruvic acid dioxygenase; PDBTitle: structural basis for inhibitor selectivity revealed by2 crystal structures of plant and mammalian 4-3 hydroxyphenylpyruvate dioxygenases 86 c2ei2A_ not modelled 98.4 15 PDB header:oxidoreductase Chain: A: PDB Molecule:1,2-dihydroxynaphthalene dioxygenase; PDBTitle: crystal structure analysis of the 1,2-dihydroxynaphthalene dioxygenase2 from pseudomonas sp. stain c18 87 c3gm5A_ not modelled 98.4 9 PDB header:isomerase Chain: A: PDB Molecule:lactoylglutathione lyase and related lyases; PDBTitle: crystal structure of a putative methylmalonyl-coenzyme a2 epimerase from thermoanaerobacter tengcongensis at 2.0 a3 resolution 88 c2zi8A_ not modelled 98.3 11 PDB header:oxidoreductase Chain: A: PDB Molecule:probable biphenyl-2,3-diol 1,2-dioxygenase bphc; PDBTitle: crystal structure of the hsac extradiol dioxygenase from m.2 tuberculosis in complex with 3,4-dihydroxy-9,10-3 seconandrost-1,3,5(10)-triene-9,17-dione (dhsa) 89 c2wl9A_ not modelled 98.3 16 PDB header:oxidoreductase Chain: A: PDB Molecule:catechol 2,3-dioxygenase; PDBTitle: crystal structure of catechol 2,3-dioxygenase 90 c2r5vA_ not modelled 98.3 10 PDB header:oxidoreductase Chain: A: PDB Molecule:pcza361.1; PDBTitle: hydroxymandelate synthase crystal structure 91 c1t47A_ not modelled 98.2 15 PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxyphenylpyruvate dioxygenase; PDBTitle: structure of fe2-hppd bound to ntbc 92 d1f1ua2 not modelled 98.2 12 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 93 c1tfzA_ not modelled 98.1 18 PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxyphenylpyruvate dioxygenase; PDBTitle: structural basis for herbicidal inhibitor selectivity revealed by2 comparison of crystal structures of plant and mammalian 4-3 hydroxyphenylpyruvate dioxygenases 94 d1f1xa2 not modelled 98.1 12 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 95 c3e0rC_ not modelled 98.1 11 PDB header:hydrolase Chain: C: PDB Molecule:c3-degrading proteinase (cppa protein); PDBTitle: crystal structure of cppa protein from streptococcus pneumoniae tigr4 96 c1cjxC_ not modelled 97.0 8 PDB header:oxidoreductase Chain: C: PDB Molecule:4-hydroxyphenylpyruvate dioxygenase; PDBTitle: crystal structure of pseudomonas fluorescens hppd 97 d1t47a2 not modelled 97.0 12 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 98 d1cjxa2 not modelled 97.0 12 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 99 d1cjxa1 not modelled 96.5 6 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 100 d1sp8a2 not modelled 96.2 11 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 101 d1sqia2 not modelled 95.7 11 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 102 d1sqda2 not modelled 93.6 10 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 103 d2joqa1 not modelled 77.1 16 Fold:Ferredoxin-like Superfamily:YbeD/HP0495-like Family:HP0495-like 104 c1rwuA_ not modelled 57.8 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical upf0250 protein ybed; PDBTitle: solution structure of conserved protein ybed from e. coli 105 d1rwua_ not modelled 57.8 19 Fold:Ferredoxin-like Superfamily:YbeD/HP0495-like Family:YbeD-like 106 c1dl5A_ not modelled 46.2 11 PDB header:transferase Chain: A: PDB Molecule:protein-l-isoaspartate o-methyltransferase; PDBTitle: protein-l-isoaspartate o-methyltransferase 107 c1htyA_ not modelled 36.5 19 PDB header:hydrolase Chain: A: PDB Molecule:alpha-mannosidase ii; PDBTitle: golgi alpha-mannosidase ii 108 c2ow7A_ not modelled 30.3 19 PDB header:hydrolase Chain: A: PDB Molecule:alpha-mannosidase 2; PDBTitle: golgi alpha-mannosidase ii complex with (1r,6s,7r,8s)-1-2 thioniabicyclo[4.3.0]nonan-7,8-diol chloride 109 c2wyhA_ not modelled 22.1 27 PDB header:hydrolase Chain: A: PDB Molecule:alpha-mannosidase; PDBTitle: structure of the streptococcus pyogenes family gh38 alpha-2 mannosidase 110 d1dl5a1 not modelled 21.8 11 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Protein-L-isoaspartyl O-methyltransferase

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0