Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	A	H	Q	L	L	I	G	K	G	M	I	T	L	N	L	K	R	I	F	L	A	L	T	L	L	P	L	F	A	V	A	A	D	D	C	A	L	S	D	P	T	L	T	V	Q	A	Y	T	V	N	P	Q	T	E	R	V	K	M	Y
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?				?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		W	Q	K	A	N	G	E	A	W	G	T	L	H	A	L	L	A	D	I	N	S	Q	G	Q	V	Q	M	A	M	N	G	G	I	Y	D	E	S	Y	A	P	L	G	L	Y	I	E	N	G	Q	Q	K	V	A	L	N	L	A	S	G	E
Secondary structure
SS confidence
Disorder							?			?												?	?																														?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		G	N	F	F	I	R	P	G	G	V	F	Y	V	A	G	D	K	V	G	I	V	R	L	D	A	F	K	T	S	K	E	I	Q	F	A	V	Q	S	G	P	M	L	M	E	N	G	V	I	N	P	R	I	H	P	N	V	A	S	S	K
Secondary structure
SS confidence
Disorder		?	?																						?	?	?	?	?																									?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		I	R	N	G	V	G	I	N	K	H	G	N	A	V	F	L	L	S	Q	Q	A	T	N	F	Y	D	F	A	C	Y	A	K	A	K	L	N	V	E	Q	L	L	Y	L	D	G	T	I	S	H	M	Y	M	K	G	G	A	I	P	W	Q
Secondary structure
SS confidence
Disorder																																																						?				?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.
Sequence		R	Y	P	F	V	T	M	I	S	V	E	R	K	G
Secondary structure
SS confidence
Disorder														?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3ohg chain A Region: 43 - 234 Aligned: 185 Modelled: 192 Confidence: 100.0% Identity: 15% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein from duf2233 family; PDBTitle: crystal structure of a protein with unknown function from duf22332 family (bacova_00430) from bacteroides ovatus at 1.80 a resolution Phyre2 PDB 2fsx chain A Region: 190 - 250 Aligned: 60 Modelled: 61 Confidence: 82.0% Identity: 10% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cog0607: rhodanese-related sulfurtransferase; PDBTitle: crystal structure of rv0390 from m. tuberculosis Phyre2 PDB 1yt8 chain A domain 4 Region: 189 - 237 Aligned: 47 Modelled: 49 Confidence: 74.7% Identity: 21% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Multidomain sulfurtransferase (rhodanese) Phyre2 PDB 1qxn chain A Region: 189 - 243 Aligned: 54 Modelled: 55 Confidence: 68.0% Identity: 7% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Single-domain sulfurtransferase Phyre2 PDB 1urh chain A Region: 186 - 246 Aligned: 60 Modelled: 61 Confidence: 64.7% Identity: 10% PDB header:transferase Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase; PDBTitle: the "rhodanese" fold and catalytic mechanism of2 3-mercaptopyruvate sulfotransferases: crystal structure3 of ssea from escherichia coli Phyre2 PDB 1wv9 chain B Region: 194 - 227 Aligned: 32 Modelled: 34 Confidence: 62.8% Identity: 16% PDB header:structural genomics, unknown function Chain: B: PDB Molecule:rhodanese homolog tt1651; PDBTitle: crystal structure of rhodanese homolog tt1651 from an2 extremely thermophilic bacterium thermus thermophilus hb8 Phyre2 PDB 3icr chain A Region: 189 - 226 Aligned: 36 Modelled: 38 Confidence: 62.7% Identity: 14% PDB header:oxidoreductase Chain: A: PDB Molecule:coenzyme a-disulfide reductase; PDBTitle: crystal structure of oxidized bacillus anthracis coadr-rhd Phyre2 PDB 2dcq chain A Region: 188 - 246 Aligned: 58 Modelled: 59 Confidence: 61.0% Identity: 5% PDB header:unknown function Chain: A: PDB Molecule:putative protein at4g01050; PDBTitle: fully automated nmr structure determination of the2 rhodanese homology domain at4g01050(175-295) from3 arabidopsis thaliana Phyre2 PDB 3d1p chain A Region: 189 - 235 Aligned: 46 Modelled: 47 Confidence: 59.0% Identity: 9% PDB header:transferase Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase yor285w; PDBTitle: atomic resolution structure of uncharacterized protein from2 saccharomyces cerevisiae Phyre2 PDB 3ilm chain D Region: 189 - 237 Aligned: 48 Modelled: 49 Confidence: 58.3% Identity: 10% PDB header:structural genomics, unknown function Chain: D: PDB Molecule:alr3790 protein; PDBTitle: crystal structure of the alr3790 protein from anabaena sp. northeast2 structural genomics consortium target nsr437h Phyre2 PDB 3nta chain A Region: 189 - 226 Aligned: 36 Modelled: 38 Confidence: 54.3% Identity: 8% PDB header:oxidoreductase Chain: A: PDB Molecule:fad-dependent pyridine nucleotide-disulphide PDBTitle: structure of the shewanella loihica pv-4 nadh-dependent persulfide2 reductase Phyre2 PDB 1yt8 chain A domain 2 Region: 189 - 235 Aligned: 46 Modelled: 47 Confidence: 51.7% Identity: 17% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Multidomain sulfurtransferase (rhodanese) Phyre2 PDB 1e0c chain A domain 1 Region: 186 - 237 Aligned: 51 Modelled: 52 Confidence: 48.7% Identity: 12% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Multidomain sulfurtransferase (rhodanese) Phyre2 PDB 1e0c chain A Region: 186 - 226 Aligned: 40 Modelled: 41 Confidence: 48.4% Identity: 15% PDB header:sulfurtransferase Chain: A: PDB Molecule:sulfurtransferase; PDBTitle: sulfurtransferase from azotobacter vinelandii Phyre2 PDB 1aqt chain A domain 2 Region: 99 - 169 Aligned: 68 Modelled: 71 Confidence: 47.6% Identity: 18% Fold: Epsilon subunit of F1F0-ATP synthase N-terminal domain Superfamily: Epsilon subunit of F1F0-ATP synthase N-terminal domain Family: Epsilon subunit of F1F0-ATP synthase N-terminal domain Phyre2 PDB 1yt8 chain A domain 1 Region: 189 - 237 Aligned: 48 Modelled: 49 Confidence: 42.2% Identity: 8% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Multidomain sulfurtransferase (rhodanese) Phyre2 PDB 1h8e chain H Region: 99 - 168 Aligned: 67 Modelled: 70 Confidence: 41.1% Identity: 18% PDB header:hydrolase Chain: H: PDB Molecule:bovine mitochondrial f1-atpase; PDBTitle: (adp.alf4)2(adp.so4) bovine f1-atpase2 (all three catalytic sites occupied) Phyre2 PDB 2hhg chain A Region: 189 - 237 Aligned: 48 Modelled: 49 Confidence: 37.6% Identity: 13% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein rpa3614; PDBTitle: structure of protein of unknown function rpa3614, possible tyrosine2 phosphatase, from rhodopseudomonas palustris cga009 Phyre2 PDB 3aax chain B Region: 186 - 229 Aligned: 43 Modelled: 44 Confidence: 37.6% Identity: 19% PDB header:transferase Chain: B: PDB Molecule:putative thiosulfate sulfurtransferase; PDBTitle: crystal structure of probable thiosulfate sulfurtransferase2 cysa3 (rv3117) from mycobacterium tuberculosis: monoclinic3 form Phyre2 PDB 1yt8 chain A domain 3 Region: 189 - 228 Aligned: 39 Modelled: 40 Confidence: 37.4% Identity: 15% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Multidomain sulfurtransferase (rhodanese) Phyre2 1 c3ohgA_ 2 c2fsxA_ 3 d1yt8a4 4 d1qxna_ 5 c1urhA_ 6 c1wv9B_ 7 c3icrA_ 8 c2dcqA_ 9 c3d1pA_ 10 c3ilmD_ 11 c3ntaA_ 12 d1yt8a2 13 d1e0ca1 14 c1e0cA_ 15 d1aqta2 16 d1yt8a1 17 c1h8eH_ 18 c2hhgA_ 19 c3aaxB_ 20 d1yt8a3 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3ohgA_ 100.0 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein from duf2233 family; PDBTitle: crystal structure of a protein with unknown function from duf22332 family (bacova_00430) from bacteroides ovatus at 1.80 a resolution 2 c2fsxA_ 82.0 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cog0607: rhodanese-related sulfurtransferase; PDBTitle: crystal structure of rv0390 from m. tuberculosis 3 d1yt8a4 74.7 21 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 4 d1qxna_ 68.0 7 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Single-domain sulfurtransferase 5 c1urhA_ 64.7 10 PDB header:transferase Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase; PDBTitle: the "rhodanese" fold and catalytic mechanism of2 3-mercaptopyruvate sulfotransferases: crystal structure3 of ssea from escherichia coli 6 c1wv9B_ 62.8 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:rhodanese homolog tt1651; PDBTitle: crystal structure of rhodanese homolog tt1651 from an2 extremely thermophilic bacterium thermus thermophilus hb8 7 c3icrA_ 62.7 14 PDB header:oxidoreductase Chain: A: PDB Molecule:coenzyme a-disulfide reductase; PDBTitle: crystal structure of oxidized bacillus anthracis coadr-rhd 8 c2dcqA_ 61.0 5 PDB header:unknown function Chain: A: PDB Molecule:putative protein at4g01050; PDBTitle: fully automated nmr structure determination of the2 rhodanese homology domain at4g01050(175-295) from3 arabidopsis thaliana 9 c3d1pA_ 59.0 9 PDB header:transferase Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase yor285w; PDBTitle: atomic resolution structure of uncharacterized protein from2 saccharomyces cerevisiae 10 c3ilmD_ 58.3 10 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:alr3790 protein; PDBTitle: crystal structure of the alr3790 protein from anabaena sp. northeast2 structural genomics consortium target nsr437h 11 c3ntaA_ 54.3 8 PDB header:oxidoreductase Chain: A: PDB Molecule:fad-dependent pyridine nucleotide-disulphide PDBTitle: structure of the shewanella loihica pv-4 nadh-dependent persulfide2 reductase 12 d1yt8a2 51.7 17 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 13 d1e0ca1 48.7 12 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 14 c1e0cA_ 48.4 15 PDB header:sulfurtransferase Chain: A: PDB Molecule:sulfurtransferase; PDBTitle: sulfurtransferase from azotobacter vinelandii 15 d1aqta2 47.6 18 Fold:Epsilon subunit of F1F0-ATP synthase N-terminal domain Superfamily:Epsilon subunit of F1F0-ATP synthase N-terminal domain Family:Epsilon subunit of F1F0-ATP synthase N-terminal domain 16 d1yt8a1 42.2 8 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 17 c1h8eH_ 41.1 18 PDB header:hydrolase Chain: H: PDB Molecule:bovine mitochondrial f1-atpase; PDBTitle: (adp.alf4)2(adp.so4) bovine f1-atpase2 (all three catalytic sites occupied) 18 c2hhgA_ 37.6 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein rpa3614; PDBTitle: structure of protein of unknown function rpa3614, possible tyrosine2 phosphatase, from rhodopseudomonas palustris cga009 19 c3aaxB_ 37.6 19 PDB header:transferase Chain: B: PDB Molecule:putative thiosulfate sulfurtransferase; PDBTitle: crystal structure of probable thiosulfate sulfurtransferase2 cysa3 (rv3117) from mycobacterium tuberculosis: monoclinic3 form 20 d1yt8a3 37.4 15 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 21 c2qe7H_ not modelled 37.4 21 PDB header:hydrolase Chain: H: PDB Molecule:atp synthase subunit epsilon; PDBTitle: crystal structure of the f1-atpase from the thermoalkaliphilic2 bacterium bacillus sp. ta2.a1 22 c2e5yA_ not modelled 36.3 27 PDB header:hydrolase Chain: A: PDB Molecule:atp synthase epsilon chain; PDBTitle: epsilon subunit and atp complex of f1f0-atp synthase from2 the thermophilic bacillus ps3 23 c3k9rA_ not modelled 36.0 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:alr3790 protein; PDBTitle: x-ray structure of the rhodanese-like domain of the alr3790 protein2 from anabaena sp. northeast structural genomics consortium target3 nsr437c. 24 c3g5jA_ not modelled 34.5 16 PDB header:nucleotide binding protein Chain: A: PDB Molecule:putative atp/gtp binding protein; PDBTitle: crystal structure of n-terminal domain of putative atp/gtp binding2 protein from clostridium difficile 630 25 d1urha1 not modelled 31.2 15 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 26 c2hldH_ not modelled 29.9 18 PDB header:hydrolase Chain: H: PDB Molecule:atp synthase delta chain, mitochondrial; PDBTitle: crystal structure of yeast mitochondrial f1-atpase 27 d1okga2 not modelled 29.8 8 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 28 c2rq7A_ not modelled 29.6 18 PDB header:hydrolase Chain: A: PDB Molecule:atp synthase epsilon chain; PDBTitle: solution structure of the epsilon subunit chimera combining2 the n-terminal beta-sandwich domain from t. elongatus bp-13 f1 and the c-terminal alpha-helical domain from spinach4 chloroplast f1 29 c3hzuA_ not modelled 28.9 10 PDB header:transferase Chain: A: PDB Molecule:thiosulfate sulfurtransferase ssea; PDBTitle: crystal structure of probable thiosulfate sulfurtransferase ssea2 (rhodanese) from mycobacterium tuberculosis 30 c3fojA_ not modelled 28.7 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of ssp1007 from staphylococcus2 saprophyticus subsp. saprophyticus. northeast structural3 genomics target syr101a. 31 c3olhA_ not modelled 28.4 13 PDB header:transferase Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase; PDBTitle: human 3-mercaptopyruvate sulfurtransferase 32 d1okga1 not modelled 28.4 6 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 33 d1tq1a_ not modelled 27.0 8 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Single-domain sulfurtransferase 34 d1uara1 not modelled 26.9 12 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 35 c2w7vB_ not modelled 26.7 15 PDB header:transport protein Chain: B: PDB Molecule:general secretion pathway protein l; PDBTitle: periplasmic domain of epsl from vibrio parahaemolyticus 36 d1rhsa2 not modelled 25.3 11 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 37 c2k0zA_ not modelled 25.2 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein hp1203; PDBTitle: solution nmr structure of protein hp1203 from helicobacter pylori2 26695. northeast structural genomics consortium (nesg) target3 pt1/ontario center for structural proteomics target hp1203 38 c2jtqA_ not modelled 25.2 5 PDB header:transferase Chain: A: PDB Molecule:phage shock protein e; PDBTitle: rhodanese from e.coli 39 c1uarA_ not modelled 24.1 12 PDB header:transferase Chain: A: PDB Molecule:rhodanese; PDBTitle: crystal structure of rhodanese from thermus thermophilus hb8 40 d1rhsa1 not modelled 23.0 10 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 41 d1uara2 not modelled 22.8 8 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 42 c1yt8A_ not modelled 22.4 15 PDB header:transferase Chain: A: PDB Molecule:thiosulfate sulfurtransferase; PDBTitle: crystal structure of thiosulfate sulfurtransferase from pseudomonas2 aeruginosa 43 d2hgsa1 not modelled 22.1 30 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:Eukaryotic glutathione synthetase, substrate-binding domain 44 c3ippA_ not modelled 21.3 18 PDB header:transferase Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase ynje; PDBTitle: crystal structure of sulfur-free ynje 45 c3tp9B_ not modelled 20.2 11 PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase and rhodanese domain protein; PDBTitle: crystal structure of alicyclobacillus acidocaldarius protein with2 beta-lactamase and rhodanese domains 46 c3i2vA_ not modelled 19.5 8 PDB header:transferase Chain: A: PDB Molecule:adenylyltransferase and sulfurtransferase mocs3; PDBTitle: crystal structure of human mocs3 rhodanese-like domain 47 c1boiA_ not modelled 18.5 11 PDB header:transferase Chain: A: PDB Molecule:rhodanese; PDBTitle: n-terminally truncated rhodanese 48 c3gk5A_ not modelled 17.8 6 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized rhodanese-related protein PDBTitle: crystal structure of rhodanese-related protein (tvg0868615)2 from thermoplasma volcanium, northeast structural genomics3 consortium target tvr109a 49 c1fs0E_ not modelled 17.1 18 PDB header:hydrolase Chain: E: PDB Molecule:atp synthase epsilon subunit; PDBTitle: complex of gamma/epsilon atp synthase from e.coli 50 d1lm8v_ not modelled 16.3 24 Fold:Prealbumin-like Superfamily:VHL Family:VHL 51 d1urha2 not modelled 15.7 17 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 52 d1gmxa_ not modelled 14.9 12 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Single-domain sulfurtransferase 53 d1hl9a1 not modelled 14.9 13 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:Putative alpha-L-fucosidase C-terminal domain 54 c3a0cA_ not modelled 14.6 6 PDB header:sugar binding protein Chain: A: PDB Molecule:mannose/sialic acid-binding lectin; PDBTitle: crystal structure of an anti-hiv mannose-binding lectin from2 polygonatum cyrtonema hua 55 d1jofa_ not modelled 12.3 14 Fold:7-bladed beta-propeller Superfamily:3-carboxy-cis,cis-mucoante lactonizing enzyme Family:3-carboxy-cis,cis-mucoante lactonizing enzyme 56 d3coxa2 not modelled 12.1 22 Fold:FAD-linked reductases, C-terminal domain Superfamily:FAD-linked reductases, C-terminal domain Family:GMC oxidoreductases 57 d2fb5a1 not modelled 11.7 23 Fold:YojJ-like Superfamily:YojJ-like Family:YojJ-like 58 d1npla_ not modelled 11.6 17 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 59 c2dpfB_ not modelled 10.6 11 PDB header:plant protein Chain: B: PDB Molecule:curculin; PDBTitle: crystal structure of curculin1 homodimer 60 c2fsdB_ not modelled 9.1 41 PDB header:viral protein Chain: B: PDB Molecule:putative baseplate protein; PDBTitle: a common fold for the receptor binding domains of2 lactococcal phages? the crystal structure of the head3 domain of phage bil170 61 d1udxa3 not modelled 9.0 15 Fold:Obg GTP-binding protein C-terminal domain Superfamily:Obg GTP-binding protein C-terminal domain Family:Obg GTP-binding protein C-terminal domain 62 d1b2pa_ not modelled 8.9 11 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 63 d2co5a1 not modelled 8.7 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:F93-like 64 c3hv1A_ not modelled 8.4 10 PDB header:transport protein Chain: A: PDB Molecule:polar amino acid abc uptake transporter substrate PDBTitle: crystal structure of a polar amino acid abc uptake2 transporter substrate binding protein from streptococcus3 thermophilus 65 c2x34A_ not modelled 8.1 14 PDB header:carbohydrate-binding protein Chain: A: PDB Molecule:cellulose-binding protein, x158; PDBTitle: structure of a polyisoprenoid binding domain from2 saccharophagus degradans implicated in plant cell wall3 breakdown 66 c3n5bB_ not modelled 8.0 14 PDB header:transcription regulator Chain: B: PDB Molecule:asr0485 protein; PDBTitle: the complex of pii and pipx from anabaena 67 d1bwua_ not modelled 7.8 13 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 68 c2xg8D_ not modelled 7.5 21 PDB header:transcription Chain: D: PDB Molecule:pipx; PDBTitle: structural basis of gene regulation by protein pii: the2 crystal complex of pii and pipx from synechococcus3 elongatus pcc 7942 69 c2o6pA_ not modelled 7.4 17 PDB header:transport protein Chain: A: PDB Molecule:iron-regulated surface determinant protein c; PDBTitle: crystal structure of the heme-isdc complex 70 c2vzkD_ not modelled 7.3 8 PDB header:transferase Chain: D: PDB Molecule:glutamate n-acetyltransferase 2 beta chain; PDBTitle: structure of the acyl-enzyme complex of an n-terminal2 nucleophile (ntn) hydrolase, oat2 71 d2o6pa1 not modelled 7.1 17 Fold:Immunoglobulin-like beta-sandwich Superfamily:NEAT domain-like Family:NEAT domain 72 c3emeA_ not modelled 6.8 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:rhodanese-like domain protein; PDBTitle: crystal structure of rhodanese-like domain protein from2 staphylococcus aureus 73 d1vpba_ not modelled 6.7 24 Fold:Putative modulator of DNA gyrase, PmbA/TldD Superfamily:Putative modulator of DNA gyrase, PmbA/TldD Family:Putative modulator of DNA gyrase, PmbA/TldD 74 c3gn3B_ not modelled 6.5 26 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative protein-disulfide isomerase; PDBTitle: crystal structure of a putative protein-disulfide isomerase from2 pseudomonas syringae to 2.5a resolution. 75 d1xd6a_ not modelled 6.4 12 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 76 d1xd5a_ not modelled 6.4 11 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 77 c3hi0B_ not modelled 6.3 13 PDB header:hydrolase Chain: B: PDB Molecule:putative exopolyphosphatase; PDBTitle: crystal structure of putative exopolyphosphatase (17739545) from2 agrobacterium tumefaciens str. c58 (dupont) at 2.30 a resolution 78 d1o59a1 not modelled 6.3 33 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Allantoicase repeat 79 c3it4B_ not modelled 6.2 19 PDB header:transferase Chain: B: PDB Molecule:arginine biosynthesis bifunctional protein argj PDBTitle: the crystal structure of ornithine acetyltransferase from2 mycobacterium tuberculosis (rv1653) at 1.7 a 80 c1gkpD_ not modelled 6.1 23 PDB header:hydrolase Chain: D: PDB Molecule:hydantoinase; PDBTitle: d-hydantoinase (dihydropyrimidinase) from thermus sp. in2 space group c2221 81 c3kihC_ not modelled 6.1 18 PDB header:sugar binding protein Chain: C: PDB Molecule:5-bladed -propeller lectin; PDBTitle: the crystal structures of two fragments truncated from 5-bladed -2 propeller lectin, tachylectin-2 (lib2-d2-15) 82 c1okgA_ not modelled 5.8 8 PDB header:transferase Chain: A: PDB Molecule:possible 3-mercaptopyruvate sulfurtransferase; PDBTitle: 3-mercaptopyruvate sulfurtransferase from leishmania major 83 d1kwga1 not modelled 5.5 25 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 84 c1vraB_ not modelled 5.5 14 PDB header:transferase Chain: B: PDB Molecule:arginine biosynthesis bifunctional protein argj; PDBTitle: crystal structure of arginine biosynthesis bifunctional protein argj2 (10175521) from bacillus halodurans at 2.00 a resolution 85 d2vera1 not modelled 5.1 23 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Bacterial adhesins Family:Dr-family adhesin

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0