Fold library entry viewer: c1gkpD_

Added to library: Tue Mar 16 12:26:45 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	L	L	I	K	N	G	E	I	I	T	A	D	S	R	Y	K	A	D	I	Y	A	E	G	E	T	I	T	R	I	G	Q	N	L	E	A	P	P	G	T	E	V	I	D	A	T	G	K	Y	V	F	P	G	F	I	D	P	H	V	H	I	Y	L	P	F	M	A	T	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T										S	S	S	B						S	S					T	T							T	T	S													S	S				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	D	T	H	E	T	G	S	K	A	A	L	M	G	G	T	T	T	Y	I	E	M	C	C	P	S	R	N	D	D	A	L	E	G	Y	Q	L	W	K	S	K	A	E	G	N	S	Y	C	D	Y	T	F	H	M	A	V	S	K	F	D	E	K	T	E	G	Q	L	R	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S													T	T												T	T	S														T	T	T		S	S												S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	A	D	G	I	S	S	F	I	F	L	S	Y	K	N	F	F	G	V	D	D	G	E	M	Y	Q	T	L	R	L	A	K	E	L	G	V	I	V	T	A	H	C	E	N	A	E	L	V	G	R	L	Q	Q	K	L	L	S	E	G	K	T	G	P	E	W	H	E	P	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			B					S	S	T	T	T	T	B																	T		B						S															T	T			S	G	G	G	T	G	G	G	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	E	A	V	E	A	E	G	T	A	R	F	A	T	F	L	E	T	T	G	A	T	G	Y	V	V	H	L	S	C	K	P	A	L	D	A	A	M	A	A	K	A	R	G	V	P	I	Y	I	E	S	V	I	P	H	F	L	L	D	K	T	Y	A	E	R	G	G	V	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T							S			S													T	T																G	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	M	K	Y	I	M	S	P	P	L	R	D	K	R	N	Q	K	V	L	W	D	A	L	A	Q	G	F	I	D	T	V	G	T	D	H	C	P	F	D	T	E	Q	K	L	L	G	K	E	A	F	T	A	I	P	N	G	I	P	A	I	E	D	R	V	N	L	L	Y	T	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			S	S					T												T	T	S	S							B									G	G	G	S	S		G	G	G	S				B			T	T	T									T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	S	R	G	R	L	D	I	H	R	F	V	D	A	A	S	T	K	A	A	K	L	F	G	L	F	P	R	K	G	T	I	A	V	G	S	D	A	D	L	V	V	Y	D	P	Q	Y	R	G	T	I	S	V	K	T	Q	H	V	N	N	D	Y	N	G	F	E	G	F	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S	S											T							T	T		T	T	T	S	S	S		S	T	T	S	B								T	T							G	G	G			S	S	S	S			T	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Sequence	D	G	R	P	S	V	V	T	V	R	G	K	V	A	V	R	D	G	Q	F	V	G	E	K	G	W	G	K	L	L	R	R	E	P	M	Y	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									T	T						T	T						T	T				B

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PDB structure

FASTA sequence

Hidden Markov model

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