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Job DescriptionP78067
Confidence100.00%DateThu Jan 5 12:33:09 GMT 2012
Rank7Aligned Residues272
% Identity29%Templatec1uarA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rhodanese; PDBTitle: crystal structure of rhodanese from thermus thermophilus hb8
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  KLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWG. APKLYLISHIPGADYIDTNEV. ESEPLWNKVSDEQLKAML
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Template Sequence  GYAHPEVLVSTDWVQEHL. . . . . . . . EDPKVRVLEV. . DEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLX
Template Known Secondary structure 

S
GGG
TTT........T
TT..
SSTT
B
TT

B
SSSSSB

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   2.......10......... 20......... 30.........40.........50.........60.........70.
 
   216...220.........230. ........240.........250.........260.........270.........280.........290....
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Query Sequence  AKHGIRHDTTVILYGR. DVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLML
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Template Sequence  ERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLXNGGRQKWVEEGRPLTTEVPSYPPGRYEVPYRDESIRAYRD
Template Known Secondary structure  TT

TT

TT
S
TTT


B
















GGG
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   72.......80.........90.........100.........110.........120.........130.........140.........150.
 
   295....300.........310.........320.........330.........340.........350.........360.........370....
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Query Sequence  DMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWN
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Template Sequence  DVLEHIIKVKEGKGALVDVRSPQEYRGELEGAL. . . RAGHIPGAK. . . . . . . NIPWAKAVNPDGTFKSAEELRALYEPLG
Template Known Secondary structure  TTS
S
T




S...

SB
TT
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GGGGB
TTS
B

GGGT
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   152.......160.........170.........180.... .....190... ......200.........210.........220.
 
   375....380.........390.........400.........410.........420.........
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Query Sequence  IKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGER
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Template Sequence  ITKDKDIVVYRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGEE
Template Known Secondary structure 

TTS


TTS

S
SSTTSTT


B
S

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   230.........240.........250.........260.........270.........280....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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