7 c1uarA_ Probab=100.00  E-value=0  Score=422.78  Aligned_columns=272  Identities=29%

Q ss_pred             CCCCCCCCCCHHHHHHHHCCCCHHHHCCCCEEEEEECCC-CHHHHHHCCCCCCEECCHHHH-CCCCCCCCCCHHHHHHHH
Q ss_conf             145566542799988752300001102588149982289-988997247986502122230-156677788989999999
Q batch____       138 KLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWG-APKLYLISHIPGADYIDTNEV-ESEPLWNKVSDEQLKAML  215 (435)
Q Consensus       138 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~iv~~~~r-~~~~Y~~gHIPGA~~i~~~~~-~~~~~~~l~~~~~~~~~l  215 (435)
                      .+++...+|+++||++++        ++.++.|||+  | +.++|.+||||||+|+|++.. .....+++|+++.|++.+
T Consensus         1 ~y~~~~~lVs~~~L~~~l--------~~~~~~iiD~--R~~~~~y~~gHIpgAi~i~~~~~~~~~~~~~~~~~~~~~~~~   70 (275)
T c1uarA_           1 GYAHPEVLVSTDWVQEHL--------EDPKVRVLEV--DEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLX   70 (275)
T ss_dssp             CCSCGGGEECHHHHHTTT--------TCTTEEEEEE--CSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHH
T ss_pred             CCCCCCCEECHHHHHHHC--------CCCCEEEEEC--CCCHHHHHHCCCCCCEEECHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf             998988600799999861--------8997599983--886799971779985881734511352335567878999999


Q ss_pred             HHCCCCCCCEEEEECC-CCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf             9668788777999879-972489999999983985247506806889976984236788665666656664668842040
Q batch____       216 AKHGIRHDTTVILYGR-DVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLML  294 (435)
Q Consensus       216 ~~lGi~~d~~VVvy~~-~~~~a~r~~~~L~~~G~~~V~vL~GG~~aW~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (435)
                      +.+||+++++|||||+ +...|+|+||+|+++||+||++|+||+++|+++|+|++++.+.+.+..+..............
T Consensus        71 ~~lgi~~~~~VVvy~~~~~~~a~r~~~~l~~~G~~~v~vl~GG~~aW~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (275)
T c1uarA_          71 ERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLXNGGRQKWVEEGRPLTTEVPSYPPGRYEVPYRDESIRAYRD  150 (275)
T ss_dssp             HHTTCCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCCCCCCCCCCCCCCCGGGEECHH
T ss_pred             HHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             85588998879998399753389999999972897258818866899987985000455455666655667543213678


Q ss_pred             CHHHHHHHHCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             49999996248985999778747722435666656568838874002243321024430266775089999999999658
Q batch____       295 DMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWN  374 (435)
Q Consensus       295 ~~~~v~~~~~~~~~~iiDaR~~~ey~G~~~~~~~~~~~GhIPGAi~~~~~~~~~~~~~~~~~d~~~k~~~el~~~~~~~g  374 (435)
                      ...+.....+..+++|||+|++.||.|......   +.||||+|+       +.++..+.+.++++++.++|+++|..+|
T Consensus       151 ~~~~~~~~~~~~~~~iiD~R~~~ey~g~~~~~~---~~ghip~a~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~g  220 (275)
T c1uarA_         151 DVLEHIIKVKEGKGALVDVRSPQEYRGELEGAL---RAGHIPGAK-------NIPWAKAVNPDGTFKSAEELRALYEPLG  220 (275)
T ss_dssp             HHHHHHHHHHTTSEEEEECSCHHHHHTCCCCCS---CCSBCTTCE-------ECCGGGGBCTTSCBCCHHHHHHHHGGGT
T ss_pred             HHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCC---CCCCCCCCC-------CCCHHHHCCCCCCCCCHHHHHHHHHHCC
T ss_conf             899999821579869996698778311234321---124435431-------0021331001265469799999988558


Q ss_pred             CCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHCCCCCCEEECCC
Q ss_conf             8899809997796078999999999848998357688688984288996240567
Q batch____       375 IKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGER  429 (435)
Q Consensus       375 i~~~k~ii~yC~sG~rAs~~~~~l~~lG~~~v~~YdGSw~EW~~~~~~Pvetg~~  429 (435)
                      ++++++||+||++|.||+.++++|+.+||+||++|+|||.||+++.++|||||++
T Consensus       221 i~~~~~ivvyC~~G~ra~~~~~~L~~~G~~nv~~Y~Gs~~eW~~~~~lPv~~g~~  275 (275)
T c1uarA_         221 ITKDKDIVVYRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGEE  275 (275)
T ss_dssp             CCTTSEEEECCCHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCSCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCCCCCCC
T ss_conf             8888769998299888999999999858998088589888997177997326779