Job Description P21169 Confidence 99.68% Date Thu Jan 5 11:37:54 GMT 2012 Rank 146 Aligned Residues 316 % Identity 13% Template c1ynuA_ PDB info PDB header:lyase Chain: A: PDB Molecule:1-aminocyclopropane-1-carboxylate synthase; PDBTitle: crystal structure of apple acc synthase in complex with l-vinylglycine Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		169	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																.	.	.	.	.																																														.
Query SS confidence																.	.	.	.	.																																														.
Query Sequence		K	D	A	Q	K	F	A	A	K	V	F	H	A	D	.	.	.	.	.	K	T	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	I	Q	A	.	G	A	T	P	V	Y	L	E	A	S	R	N	P	F	G
Query Conservation																.	.	.	.	.																																														.
Alig confidence																.	.	.	.	.																																								.						.
Template Conservation																																																												.
Template Sequence		K	A	M	V	D	F	M	A	E	I	R	G	N	K	V	T	F	D	P	N	H	L	V	L	T	A	G	A	T	S	A	N	E	T	F	I	F	C	L	A	D	P	G	E	A	V	L	I	P	T	P	Y	Y	P	G	F	D	R	.	D	L	K	W	R	T	G	V	E	I	V	P	I	H	C	T	S	S	N	G	F
Template Known Secondary structure												T	T	T	S	S				G	G	G																					T	T							S	S			T	T				.		T	T	T	T	T											G	G	G	T	T
Template Predicted Secondary structure																																																												.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.									.	.	.
Query SS confidence																																											.									.	.	.
Query Sequence		F	I	G	G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	.	T	Y	D	G	T	V	Y	N	.	.	.	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F
Query Conservation																																											.									.	.	.
Alig confidence				.	.	.	.	.	.	.	.																		.	.	.	.											.									.	.	.																						.
Template Conservation				.	.	.	.	.	.	.	.																		.	.	.	.																																												.
Template Sequence		Q	I	.	.	.	.	.	.	.	.	T	E	T	A	L	E	E	A	Y	Q	E	A	E	K	R	N	L	.	.	.	.	R	V	K	G	V	L	V	T	N	P	S	N	P	L	G	T	T	M	T	R	N	E	L	Y	L	L	L	S	F	V	E	D	K	G	I	H	L	I	S	D	E	I	Y	.	S	G	T	A	F
Template Known Secondary structure				.	.	.	.	.	.	.	.															T	T		.	.	.	.									S	S		T	T	T																				T								T	T	.	G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																		.	.	.	.																																												.
Template SS confidence
		172	.									.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		I	P	M	M	A	D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	.	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N	A	F	M	L	H	A	S	T	S	P	F	Y	P	L	F	A	A	L
Query Conservation																																		.
Alig confidence																																		.																.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.
Template Sequence		S	S	P	S	F	I	S	V	M	E	V	L	K	D	S	E	V	W	Q	R	V	H	V	V	Y	S	L	S	K	D	L	G	L	P	G	F	R	V	G	A	I	Y	S	N	D	D	M	V	.	.	.	.	.	.	.	.	V	A	A	A	T	K	M	S	S	F	G	L	V	S	S	Q	T	Q	H	L	L	S	A	M
Template Known Secondary structure		S	S	S									T	T				G	G	G	G							S	S	S	S	S			G	G	G								S					.	.	.	.	.	.	.	.									T	T	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.									.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	N	A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A	S	D	R	R	F	F	S	F	E	P	G	A	K	W	H	G	F	E	G	Y	A
Query Conservation
Alig confidence												.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	D	K	K	L	T	K	N	Y	.	I	A	E	N	H	K	R	L	K	Q	R	Q	K	K	L	V	S	G	L	Q	K	S	G	I	S	C	L	N	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T									.																					T	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.		.	.	.	520	.	.	.	.							.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																																									.									.	.	.	.	.	.
Query SS confidence																																									.									.	.	.	.	.	.
Query Sequence		A	D	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	.	R	E	N	G	I	V	P	E	.	.	.	.	.	.	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	S	H	E	K	L	A	Q	L	V	A	M
Query Conservation																																									.									.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																							.	.	.	.	.							.									.	.	.	.	.	.													.
Template Conservation		.	.	.	.	.	.																							.	.	.	.	.																																		.
Template Sequence		.	.	.	.	.	.	A	G	L	F	C	W	V	D	M	R	H	L	L	R	S	N	T	F	E	A	E	M	.	.	.	.	.	E	L	W	K	K	I	V	Y	E	V	H	L	N	I	S	P	G	S	S	C	H	C	T	E	P	G	W	F	R	V	C	F	A	.	N	L	P	E	R	T	L	D	L	A	M	Q	R
Template Known Secondary structure		.	.	.	.	.	.	S	S	S							G	G	G		S	S	S	S						.	.	.	.	.									T	T							T	T	T	T	T		S	S	T	T							S	.	S	S
Template Predicted Secondary structure		.	.	.	.	.	.																							.	.	.	.	.																																		.
Template SS confidence
								357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.						.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.	.	.
		551	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	F	E	Q	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	A	F	V	G	E	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions